Cyprinus carpio (common carp): 109058771
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Entry
109058771 CDS
T05134
Symbol
slc6a1b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1b
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109058771 (slc6a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccar02000
]
109058771 (slc6a1b)
Transporters [BR:
ccar02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109058771 (slc6a1b)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109058771
NCBI-ProteinID:
XP_042589461
Ensembl:
ENSCCRG00000016189
UniProt:
A0A9R0AA96
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Position
B11:1713380..1721946
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AA seq
599 aa
AA seq
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MATNGTKASDGHVLTELNEAPTANDKPKTLVVKVQKKKDLPDRETWQGKFDFLLSCVGYA
IGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLETSLGQYTSIGGLGVWKLAPM
FKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTELPWKSCDNPWNTDKCFSNYSMAN
TANMTSAVVEFWERNMHQLTDGLEKPGEIRLPLAITLAIAWVLVYFCIWKGVGWTGKVVY
FSATYPYFMLFILFIRGVTLPGAKEGILFYITPEFSKLKESEVWLDAATQIFFSYGLGLG
SLIALGSYNPFNNNVYKDSIIVCCINSFTSMFAGFVIFSIVGFMAHITKRPIADVAASGP
GLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPHLLRGRRE
IFIAVVCLVSYLIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWFYGVNKFY
GNIEEMIGYKPCIWWKLCWVAFTPLIVAGVFLFSAVQMVPLTLNNYVFPKWGQGVGWCMA
LSSMVLIPGYMGYMFLTLKGSYKERLRIMTQPTTVVRTQENGPEQQPENPTPANDEAYI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaacggcacgaaagcatctgacggacatgttttaaccgagctgaacgaagcg
cccaccgccaacgacaaaccaaaaactctggtggtgaaagttcagaagaaaaaggatctt
cccgacagagaaacatggcagggaaaatttgactttcttctgtcttgtgttggctatgcc
atcggacttggcaatgtctggagatttccctatctatgtggaaaaaacggaggaggggca
ttcttgattccttactttttgaccctcatatttgctggggtcccgttgtttcttctggaa
acttccctcggtcagtacacgtccattggtggtcttggagtgtggaaactggcccctatg
ttcaaaggtgttggcctggcagcagcagtcctgtcgttctggcttaacatttactacata
gtcataatcgcttgggcaatttactacctgtataactcattcaccacagagctcccctgg
aaatcttgtgacaacccttggaatacagacaaatgcttctccaactacagcatggcaaac
accgccaatatgacgagcgccgtcgtggagttctgggaacgtaacatgcatcaactgact
gatggtttggaaaagccgggagagataagactgccactagcaataacactggccattgcc
tgggttctggtctatttttgtatctggaagggcgtaggctggactggaaaggtggtatat
ttctcagcaacatacccatacttcatgctgtttatcctgttcatccgtggagtgacgctg
cctggagcgaaagagggcattttgttctatatcacgcctgagttcagcaagctgaaagaa
tcagaggtgtggcttgatgcagccactcagatcttcttctcttacggtctgggcctgggc
tctctgatcgcccttgggagctacaaccctttcaacaataatgtttacaaagattctatc
atcgtctgctgcatcaattccttcaccagtatgttcgctggattcgtcattttctctatc
gtaggtttcatggcccacatcacaaagcggcccatagcagacgtggctgcatcagggcca
ggactggcgttcttagcctaccccgaggcggtcacacagctgcccatctcaccgctctgg
gcaatcctgtttttctccatgttgcttatgcttggcattgacagtcagttctgtacggtg
gagggattcatcactgctctcgttgacgagttcccccacttgctacgaggaagacgagag
atctttatcgctgtcgtctgccttgtgtcttatttgattggcctgtcaaacatcacacag
ggtggtctctacgtgttcaaactgtttgactactattctgccagtggaatgtgtctgctg
ttcctggtgttctttgaatgcatctccatatcctggttctatggtgtcaataaattctac
ggcaacattgaggagatgattggatacaagccctgcatttggtggaagctgtgctgggtc
gcattcacccctctaattgtggccggtgtgttcctcttcagcgccgttcagatggtcccg
cttacactgaacaattacgtgttcccaaagtgggggcaaggtgtaggctggtgcatggcc
ctgtcgtccatggttcttatcccaggatacatgggctacatgttcctcaccctgaagggc
tcatataaagagcgccttcggatcatgactcagcccacgacggtggttcggactcaagag
aacgggccagaacagcaacctgaaaaccccactccagccaatgacgaggcctacatctaa
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