Cyprinus carpio (common carp): 109058813
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Entry
109058813 CDS
T05134
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109058813
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109058813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Roughex
Motif
Other DBs
NCBI-GeneID:
109058813
NCBI-ProteinID:
XP_042632707
UniProt:
A0A9R0BF73
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Position
A19:complement(16186987..16189932)
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AA seq
443 aa
AA seq
DB search
MSFPQLGYPQFLNASQELYGAERTTVMPSSPREGSSENSATAAAAITPMLGMYANPWTVQ
NYSAFLPYNTAELALLSQMGSQYELKDNPGAHPPGFAVHAAPGFYPYGQYQYGDPARAKS
ATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTW
GRSAEDRDGRIFDSDNEDDVDKNDDDEEIDLETIDMDKPEEPRGDQNKESSDNQSERGNV
ETPRILSSPSALKNTDSPISSSNKEQSVVKSVGEVSPGAPVCQRPGNSKPKIWSLAETAT
SPDNTQKLGVSSTPAGLRASPSTHPAFLSTNGIYTCQIGKLHNWASAAFLSANSLMGVRS
LLSQNTNIPNHSPVTNPEKKSSSASGSPCLDSDSSSDSFSPKHNDQENLQRIESPTLAPR
PPFPVIQDRSHHETSQRALKTIS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccccagctgggttacccacagttcctaaacgcctcccaagagctgtacgga
gcggagcgcacgactgtcatgccgtcctctccgcgcgagggaagctcggagaacagcgcg
actgcagcggcggcgatcactccgatgctcggcatgtacgcgaatccgtggaccgtacaa
aactatagcgccttcttaccttacaacactgccgagcttgccctgctctctcagatgggg
tcgcagtatgagttgaaggataaccccggggctcatccaccaggatttgcggtccacgct
gcgcccggtttctacccatacggccagtaccagtatggtgacccggcccgggccaagagc
gctaccagagagaccaccagcacactgaaagcatggctgcaggagcataaaaagaacccg
tatcccaccaagggcgagaagatcatgctggccatcatcactaagatgacccttacgcag
gtgtccacctggttcgccaacgcgcgccggagactcaagaaggagaataaagtgacctgg
ggtcgcagcgcggaggacagagacggacgaatttttgacagcgacaatgaggacgacgtg
gacaaaaacgacgacgatgaggaaatcgatctagagaccatcgatatggacaagcctgag
gagcccagaggagaccagaacaaggaaagctcggataatcagagcgagagaggaaacgtg
gaaacaccgcggatattatcctcaccatcagcacttaaaaacacggacagccctatctcg
agtagtaataaagagcagagtgtggtcaaaagcgttggtgaggtgtctcctggtgcaccg
gtgtgtcagcggcctgggaacagcaaacccaaaatctggtccttagcggagacggcgaca
agtcccgataacacgcagaaactcggtgtctcctcgacgcccgcaggcctcagggcctca
ccctcgacccatcccgctttcctctccactaacgggatttatacgtgccagattgggaaa
ctacacaactgggcgagcgccgcgttcctcagtgcaaattctctgatgggtgtgcgctcc
cttttgagtcaaaacactaacatcccaaaccacagccccgttacgaaccccgaaaagaaa
tcctcgtctgcctctgggtctccttgtctagacagcgacagctcatccgacagtttcagt
cccaaacataatgatcaagagaaccttcagagaattgaatccccaacacttgcgcccaga
ccaccgtttccggtcatccaagacaggtctcatcatgaaacatcacagcgcgctctgaag
actatttcatga
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