Cyprinus carpio (common carp): 109058938
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Entry
109058938 CDS
T05134
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109058938
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109058938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
BUD22
Motif
Other DBs
NCBI-GeneID:
109058938
NCBI-ProteinID:
XP_042621489
Ensembl:
ENSCCRG00000030162
UniProt:
A0A9R0B3S5
LinkDB
All DBs
Position
A10:17313378..17338423
Genome browser
AA seq
1420 aa
AA seq
DB search
MLRDASGTFLDEKSTVLWAAASRDPHAPQTMDPGQDLLLAALSESGICPNDLFDVDPQDT
LPVPASQQSVSLNALDIGLSNEVSGVVRIEPAVPPTPTVTIREKPQPSTTTFVLNQLNQL
PSLGTIVVTKPSAGTTSRQTITVTKVVHTSSTAQRSSSSSPTVCTVVPPNEQIRLKDLLR
TSSLKTSSLGELMKLKPPADIAQPVATATATGTKLILISTKMMNRSVELNNGLKKEVSGK
DVARIWVNDDMKMRSFSPVNKLPGMKEEEEPEEEEEEELGHAETYAEYMPMKLRIGLRHP
DPVVETSSLSSVNPPDVWYRLSIPEETIDRGWLSALQLEAITYAAQQHETFLPNGDRASY
LIGDGAGVGKGRTIAGIIYENYLLGRKRSLWFSVSNDLKYDAERDLRDIGAKNIQVHSLN
KFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIIFDE
CHKAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEG
TPFKEFTNFIQAVERRGVGAMEIVAMDMKMRGMYIARQLSFTGVTFKIEEVPLTQDYIKM
YNKSVRLWVRAREKFQQAANLMDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLA
REEVKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLVEKHFPAPDRQKL
FSLLGIDLSVKETPSPSETSKEKKGKKRKGPETKKQVKKARKSGGLSGTSSDESNSDDSD
KEVESDDSFNSVSSGEEDEDDFNPFKDDSSEDEEDDPWLIRKDTKKSKDKRNKKKKKSID
PDSIHSALLASGLGTTRPTFTTPTIKPSNNTVAIAKSEPEENSCVTSQDAVEDAQRMKRD
LLEQLEQLAENLPPNTLDELIDELGGPDIVAEMTGRKGRVVSNDDGTISYESRSELDVPV
EILNLTEKQRFMDGDKNIAIISEAASSGISLQADRRVKKADRAIQQFGRTHRSNQVTAPE
YVFLISELAGEQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMK
SIVSLDSPLVSPPADFDGDFFKEIRNGLIGVGLINVEDRSGVLSLDKDYNNIGKFLNRIL
GMEVHQQNALFQYFSDTLYAVIQNAKKTGRYDMGILDLGSGDEKVKKVDVKKFLTPGYST
SGHVELYTVSVERGMSWEDATHVWADQNGPDDGFYVQVRNNKKISILVKEVNLKKRLFMV
YRPNIGKQVKLETYADIKKRSKKVLSDDAKQHWIDQYNSSANVCSHAYWRGNCKKVSVGL
QCEIGLRCRTYYVLCGSVLSVWTKVEGVLASVSGANVKMQIVRLRTEDGQRIVGLIIPAN
CVSPLINILSSSDQSQQLAVQQQQMWQQLHPQSISHTINT
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcgacgcgtcgggaacatttctggacgagaaatcgactgttttgtgggctgca
gcgtcacgtgacccgcacgcgcctcagacaatggatcctggacaagatttgcttctggct
gctctcagtgaaagtggaatctgccccaatgatctgtttgatgttgatcctcaggacaca
cttccagtccctgcttcacaacagtcagtctcattaaatgcacttgacatcggtctcagt
aatgaagtttctggagttgtcaggattgaacctgcagttccacctactcctacagtcaca
atcagggagaagcctcagccctcaacaaccacctttgttttaaatcaactgaatcagttg
ccatcgctgggtacaattgtagtgaccaaaccatcagccggtaccacctccaggcagacc
atcacagtaaccaaggtggtacacacaagttcgacagcacaacggagctcttcgtcctct
cccaccgtttgcactgtggtcccaccgaatgagcagatcagattgaaggaccttctcaga
accagcagcctgaagacaagcagccttggagagcttatgaagttgaagcccccagctgac
atagcgcaacctgttgctacggcaacagccacaggcacaaaacttattctgatctccaca
aagatgatgaacagatcagtggaattaaacaatggcttgaaaaaggaagtgtccggcaaa
gatgtagcaagaatctgggtcaatgatgacatgaaaatgcggagcttctcacctgtaaat
aaattgccaggaatgaaggaggaagaggaaccagaggaagaggaggaggaggagctgggt
catgcagagacatatgccgaatacatgccgatgaaactgagaattggactgcggcatcct
gatcctgtggtggagaccagctctctgtcaagtgtcaacccgccagatgtgtggtacaga
ctttccattccagaggagaccatagatagaggctggttatctgccttacagcttgaggcc
atcacgtatgctgctcagcaacatgagacattcctaccaaatggagacagagcatcctac
ttgattggagatggggctggcgttggaaagggtagaaccattgctggaatcatatatgaa
aattatcttcttggcaggaaaaggtccctctggtttagtgtctcaaatgacttgaaatac
gatgcagagagggacttgagagacattggagcaaagaacattcaggtccattcgctaaac
aagttcaaatatggaaagatctcatcaaaacacaatgggagtgtgaaaaaaggtgtgatc
tttgccacatactcatccttgatcggagagagccagtctgggggaaagtacaagacgaga
ttaaaacagttactacactggtgtggagacgactttgatggtgttatcatatttgatgag
tgtcacaaagccaaaaatgtttgccctattgggtcatccaagcccacaaagaccgggcta
gcggttttagagctgcagaacaagctgccaaaagcccgggttgtgtacgcaagtgctaca
ggagcatccgagccccgcaatatggcctacatgaatcgccttgggatctggggggaggga
actccttttaaagaatttacaaattttatccaagctgttgaaagaagaggtgttggtgcc
atggagattgttgccatggatatgaaaatgagaggaatgtacatcgctcgacagctgagc
ttcacgggtgtgacatttaaaatcgaagaagttcccttaacacaggactacatcaagatg
tacaacaaatcagttcgcttgtgggtaagagcaagagagaagttccagcaagccgctaac
ctgatggatgcagaacaacggatgaaaaagtccatgtggggtcagttctggtctgctcac
cagaggttcttcaagtacctgtgcattgcctccaaggttcggagagtggtgcagctggcc
agagaggaggttaaaaatggaaagtgtgtggtgattggtcttcaatcaactggagaggct
cgaacccttgaggccttggaggagggaggaggcgagctcaatgacttcgtttccactgca
aagggtgtactgcagtccctggtggagaagcattttcctgcaccagacagacaaaaactc
ttcagtcttttaggcattgacctaagtgtgaaggaaacgccttccccttcagaaacctct
aaagagaagaaaggcaaaaagcgaaaaggtccagaaacaaagaagcaagtgaagaaggct
cgtaaatctggtggtctgtctggtaccagctcagatgagagcaactctgacgattcagac
aaagaggtggaaagcgacgacagcttcaattcggtcagctcaggggaggaggatgaagat
gacttcaacccctttaaggatgattccagtgaggatgaggaagatgatccgtggctcatc
agaaaagacacaaaaaagagcaaagacaagaggaacaagaagaagaaaaagagcattgat
ccagactctattcacagtgccttgttagcctccgggcttggaacaaccagacccactttt
acaacccccaccatcaaaccttcaaacaacacggttgctatagccaaaagtgagccagag
gagaacagctgtgtgacgagtcaggatgctgttgaagatgcccagcggatgaagagggac
ctgctggagcaactggagcagctggcagagaatctgccgcccaatacgctcgacgaactc
atcgatgagctgggaggccctgatattgttgcagagatgactggccgcaaaggcagggta
gtcagcaatgatgatggcaccatttcctacgagtctcgctcagagcttgatgttccagtt
gaaatcttaaacctcacggagaagcagaggttcatggatggtgataagaacattgcgatt
atctcagaggctgccagctctgggatttcacttcaagccgaccgcagagtgaagaaagct
gacagagctattcagcagtttggtcgaacacaccgatccaaccaggtcacagcacctgag
tatgtgttcctcatctctgaactcgctggagagcaacgattcgcttcgattgttgccaaa
cgtctagaaagcctgggggcattaacgcatggagacagaagggccacagagacgagagat
ctcagccgatttaactttgacaacaaatacggcagaaacgctctggaaatagttatgaag
tctattgtcagtctggattctccgttagtgtctccacctgctgactttgacggggatttc
tttaaagaaatccgcaatggtttaattggagtggggctgataaatgtggaggatagatct
ggtgttctctcactggacaaagactacaacaacatcgggaagttcttgaacaggattctt
ggtatggaagtccatcaacaaaatgctctctttcagtatttctccgacactttgtacgct
gtcattcagaatgccaaaaagactggaagatatgatatgggaattttagatttgggctct
ggagatgaaaaagtaaagaaagttgatgtaaagaaattcttgactccaggatattccacc
tcagggcacgtggagctctatacagtgagtgtggaacggggaatgtcttgggaggatgcc
actcacgtctgggctgaccagaacggaccagatgatggcttttacgtacaggtgcgcaat
aacaagaaaatctccatactggtaaaggaggtcaatctcaaaaagagactctttatggtg
tacagaccaaatataggaaaacaagttaaactggagacctatgcagacatcaagaagaga
agtaaaaaggtcctctctgatgatgccaagcagcactggattgatcagtacaactcctcg
gccaacgtctgctcgcacgcgtactggcgagggaactgtaagaaggtgtcagtggggcta
cagtgtgagatcgggctgcggtgcaggacgtactacgtcctctgtggctccgtcctcagt
gtgtggaccaaagtggagggcgtactggcttcagtcagcggagccaacgtgaagatgcag
attgtacgtttgagaacagaggacgggcagaggattgtgggtctgatcattcctgccaac
tgtgtgtcgcctctgatcaacatcctgtcatcatcggatcagtctcagcagctggccgtg
cagcagcagcaaatgtggcagcaactccatccgcagagcatcagccacaccatcaacaca
tag
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integrated database retrieval system
