Cyprinus carpio (common carp): 109058953
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Entry
109058953 CDS
T05134
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109058953 (wdr18)
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
109058953 (wdr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_alt
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WDR54
Ge1_WD40
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
109058953
NCBI-ProteinID:
XP_042590434
Ensembl:
ENSCCRG00000007598
UniProt:
A0A8C2AK32
LinkDB
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Position
B11:complement(20753305..20814862)
Genome browser
AA seq
431 aa
AA seq
DB search
MSAPVEVVLSADSAGQLFNCAVFDPHSGSEFLSYRGGNTSSRSLTVLNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGIVTCLCASPDGLYVLAGIAEAIYLWEMSTGNLLAILSRH
YQDVSCICFTDDSSHFVSGGKDNLALIWNLSSVVQLDSSRTPEPRHILSRHSLPITDIHC
GLMGPQARVATASLDQTVKVWEVSSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIF
QVSLCSTSLSRDKTFQTDSDGNQVFKGHRNLVTCLSVSMDGTLLLSGSNDETVRMWDVQS
KQCIWSINHKGPVTNAVIIPAPANMFLADSHPAVPLPRFSRHLNPSEQGDGTGSGGMCLR
LGADTQEPEGTYLEKADELYSLMCAVTDKSVFGDGENTKVRVSELEEEVKTLKKINKDLY
EFSTQLLTKPN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcccgtggaggtagttctgtctgcagattcagcggggcagctgtttaactgc
gcggttttcgaccctcattccgggtcagaattcttgtcctatcgcggaggtaacacgtcc
tccaggtctttaacagtcctgaacggagaatacatattaggagctcaactcggcaagaac
ttcataaacgtgtgggagatccaaagaaaggaccagctacagcagaagattgtgtgtcct
gggatcgtaacgtgtctctgtgcgtctcctgatggcctctatgtcctggcaggcattgct
gaagctatatacctgtgggagatgtcaacaggaaatttgctggctattttgagtcgacac
tatcaggacgtgagttgcatctgtttcactgatgacagcagtcattttgtgtcgggaggg
aaagacaatctggctctcatatggaatctctccagcgttgtgcagttggattcgtcccgg
acaccagaaccgcgtcacattctttcccgccactccctccccatcactgacatccactgt
ggcctgatgggaccacaagcccgtgttgccaccgcatccctggaccaaaccgtcaaggtc
tgggaagtttcctctggggagatgctcctgtctgtcctcttcgacgttggcatcatgtca
gtgacctttgacccctgcgagtatttcctattctgcggaggaagtgatggcaatattttt
caggtgtctctctgcagcacgagtttaagccgggataaaaccttccagacggacagtgac
ggcaatcaggtgttcaaaggacacagaaatctggtgacatgtttgtctgtgtctatggac
gggaccctcctgctgtccggctccaacgatgagactgtcaggatgtgggacgttcagagc
aagcagtgcatatggtccatcaaccacaagggtcccgtgaccaatgctgttatcatacca
gcacctgccaacatgttccttgctgacagtcatccagccgtcccactgccacggttcagt
cgccacctgaacccctctgagcagggtgatggcacaggctccggaggcatgtgtctgaga
ctgggagccgacacacaggagcctgaggggacgtatttggagaaagcagacgagctctac
tccctgatgtgtgctgtcactgacaagagtgtgtttggggatggggagaacactaaagtt
cgagtgtctgaactggaggaggaggtgaagaccctgaagaagatcaataaagatctgtat
gagttctccactcagctcctgaccaaacccaactag
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