Cyprinus carpio (common carp): 109058991
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Entry
109058991 CDS
T05134
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109058991
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109058991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109058991
NCBI-ProteinID:
XP_042589165
Ensembl:
ENSCCRG00000020386
UniProt:
A0A9Q9WT92
LinkDB
All DBs
Position
B10:20880125..20901051
Genome browser
AA seq
1405 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLFDVDPQDTLPLPASQQSVSLNALDIGLSNEASGIVRID
PTVPPAPTVTIREKPQPSTTTFVLNQLNQLPSLGTIVVTKPSAGTTSRQTITVTKVVHTS
STAQRSSSSSPTVCTVVPPNNEQIRLKDLLRTSNLKTSSLGELMKLKPPPDIAQPVATAT
ATGTKVILISTKMMNRSAELNNGLKKEVSSKDVARIWVNDDMKVRSFSPVNKLPGMKEEE
EPEEEEEEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVNPPDVWYRLSIPEETID
RGWLSALQLEAVTYAAQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRS
LWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKIKYGKISSKHNGSVKKGVIFATYSSLIG
ESQTGGKYKTRFKQLLHWCGDDFDGVIIFDECHKAKNVCPIGSSKPTKTGLAVLELQNKL
PKARVVYASATGASEPRNMAYMNRLGIWGEGTPFKEFTNFIQAVERRGVGAMEIVAMDMK
LRGMYIARQLSFTGVTFKIEEVPLTQVYIKMYNKAVRLWVSAREKFQQAANLMDAEQRMK
KSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEG
GGELNDFVSTAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSVKETPSPKETSAEQKGKKRK
GPETKKQVKKARKSGGLSGTSSDESNSDDSDKDAESDDSFKSVSSGEEDEDDFNPFKDDS
SEDEEDDPWLIRKDTKKSKDKRNKKKKKSIDPDSIQSALLASGLGTTRPTFTTPTIKPSN
NTVAVAKSEPEESSCVTSQDAVEDAQRMKRDLLEKLEQLAEDLPPNTLDELIDELGGPDN
VAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGDKNIAIISEAASSGI
SLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFA
SIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVSLDSPLVSPPAD
FDGDFFKEIRNGLIGVGLINVEDRSGVLSLDKDYNNIGKFLNRILGMEVHQQNALFQYFS
DTLSAVIQNAKKSGRYDMGILDLGSGDEKVKKVDVKKFLTPGYSTSGHVELYTVSVERGM
SWEDATHVWADQNGPDDGFYVQVRNNKKIAILIKEVNPRKRLFMVYRPNIGKQVKLETYV
DIKKRSKKVLSDDAKQHWIDQYNSSANVCSHAYWRGNCKKVSVGLQCEIGLRCRTYYVLC
GSVLSVWTKVEGVLSSVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLINILSSSDQS
QQLAVQQQQMWQQLHPQSISHTVNT
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaagatttgcttctggctgctcttagtgaaagtggaatctgccctaat
gatctgtttgatgttgatcctcaggacacacttccactccctgcttcacaacagtcagtc
tcattaaatgcacttgacatcggtctcagtaatgaagcttctggaattgtcaggattgat
cctacagtaccacctgctcctacagtcacaatcagggagaagcctcagccctctacaacc
accttcgttttaaatcaactgaatcagttgccatcactgggtacaattgtagtcaccaaa
ccatcagccgggaccacatccaggcagaccatcacagttactaaggtcgtacacacaagt
tcgacagcacaacggagctcttcgtcctctcccaccgtttgcactgtggtcccaccgaat
aatgagcagatcaggttgaaggaccttctcagaaccagcaacctgaagacaagcagcctt
ggagagcttatgaagttgaagcccccacctgacatagcgcaacctgttgctacggcaaca
gccacaggcacaaaagttattctgatctccactaagatgatgaacagatcagcggaatta
aacaatggcttgaaaaaggaagtgtccagcaaagatgtagcaagaatctgggtcaacgat
gacatgaaagtgcggagcttctcacctgtaaataaattgccaggaatgaaggaggaagag
gaaccggaggaagaggaagaggaggaactgggtcatgcagagacgtatgccgaatacatg
ccaatgaaactgagaattggactgcggcaccctgatcctgtggtggagaccagctctctg
tccagtgtcaacccaccagatgtgtggtaccgactttccattccagaggagaccatcgat
agaggctggttatctgccctacagcttgaggcagtcacgtatgctgctcagcaacatgag
acattcctaccaaatggagacagagcagcctacttgattggagatggagctggcgttgga
aagggtagaaccattgctggaatcatatatgaaaattatcttcttggcaggaaaaggtcc
ctctggtttagtgtctcaaatgacttgaaatacgatgcagagagggacttgagagacatc
ggagcaaagaacattcaggtccattcactaaacaagattaaatatggaaagatctcatcg
aaacacaatgggagtgtgaaaaaaggtgtgatctttgccacatactcatccttgattgga
gagagccagactgggggaaagtacaagacgagattcaaacagttactacactggtgtgga
gacgactttgatggtgttatcatatttgatgagtgtcacaaagccaaaaatgtttgccct
attgggtcatccaagcccacaaagactgggctagcggttttagagctgcagaataagctg
ccaaaagcccgggttgtgtacgcaagtgctacaggagcgtccgaaccacgcaatatggcc
tacatgaatcgccttgggatctggggggaaggaactccatttaaggaatttacaaatttt
atccaagctgttgaaagaagaggtgttggtgccatggagattgttgccatggatatgaag
ctgagaggcatgtacatcgctcgacagctgagcttcacaggcgtgacgtttaaaatcgaa
gaagttcccttaactcaggtgtacatcaagatgtacaacaaagcagttcgcttgtgggtc
agtgcaagagagaagttccagcaagctgccaacctgatggatgctgaacaacggatgaaa
aagtccatgtggggtcagttctggtccgcccaccagaggtttttcaagtatctgtgcatt
gcatccaaggttcgcagagtggtgcagctggccagagaggaggttaaaaatggaaagtgt
gtggtgattggtcttcaatcaactggagaggctcgaacccttgaggccttggaggaggga
ggaggcgagctcaatgactttgtctccactgcaaagggtgtactgcagtccctggtagag
aagcattttcctgcaccagacagacaaaaactcttcagtcttttaggcatcgacctaagt
gtgaaggaaacgccttcacctaaagagacatccgctgagcagaaaggcaaaaagcgaaaa
ggtccagaaacaaagaagcaagtgaagaaggctcgtaaatctgggggtctgtctggtacc
agctcagacgagagcaactccgatgattcagacaaagatgcggaaagcgacgacagcttc
aagtcggtcagctcaggggaggaggatgaagatgacttcaacccttttaaggatgattcc
agtgaggatgaggaagatgatccgtggctcatcagaaaagacactaaaaagagcaaagac
aagaggaacaagaagaagaaaaagagcattgatccagactccattcaaagtgccttgtta
gcctccgggcttggaacaaccagacccacttttacaacccccaccatcaaaccctcaaac
aacacggttgctgtagccaaaagtgagccagaggagagcagctgtgtaaccagtcaggat
gctgttgaagatgcccagcggatgaagagggacctgctggagaaactggagcagctggca
gaggatctgccgcctaacacgctcgatgaactcatcgatgagctgggaggccctgataat
gttgcagagatgactggccgcaaaggcagggtagtcagcaatgatgatggcagcatttcc
tacgagtctcgatcagaacttgacgttccagttgaaatcttaaacctcacggagaagcag
aggttcatggatggtgataagaacatcgcaattatctcagaggctgccagctctggtatt
tcacttcaagccgaccgcagagttaagaaccagaggaggagggtacacatgacattagag
ctgccctggagtgctgacagagctattcagcagtttggtcgaacacaccgatccaaccag
gtcacagcacccgagtatgtgttcctcatctctgaacttgctggggagcagcgattcgcc
tcgattgttgccaaacgtctagaaagcctgggggcgttaacgcatggagacagaagggcc
acagagacgagggatctcagccgatttaactttgacaacaaatatggcagaaacgctctg
gaaatagttatgaagtctattgtcagtctggactctcctttagtgtctccacctgctgac
tttgatggggatttctttaaagaaatccgcaatggtttaattggagtggggctgataaat
gtggaggatagatctggtgttctctcactggacaaagactacaacaacatcgggaagttc
ttgaacaggattcttggtatggaggtccatcagcaaaatgctctctttcagtatttctcc
gacactttgagcgctgtcattcagaatgctaaaaagagtggaagatacgatatggggatt
ttagatttgggctctggagatgagaaagtaaagaaagttgatgtaaagaaattcttgaca
ccaggatattccacctcagggcacgtggagctctatacagtgagcgtggagcggggaatg
tcatgggaggatgccacccatgtctgggccgaccagaacggtccggatgatggcttttat
gtacaggtgcggaataacaagaaaattgccatcctgataaaggaggtcaatcccagaaag
agactctttatggtgtacagaccaaatataggaaaacaagttaaactggagacttatgtg
gacatcaaaaagagaagtaaaaaggtcctctctgatgatgccaagcagcactggattgat
cagtacaactcctcagctaacgtctgctcgcacgcgtactggcgagggaactgtaagaaa
gtgtcggtggggctacagtgtgagatcgggctgcggtgcaggacatactatgtcctctgt
ggctctgtcctcagtgtgtggaccaaagtggagggcgtgctgtcctcagtcagtggaacc
aatgtgaagatgcagattgtacgtttgagaacagaggacgggcagagaattgtgggtctg
atcattcccgccaactgcgtgtcgccgctgatcaacatcctgtcatcatcggatcagtct
cagcagctggccgtgcagcagcagcaaatgtggcagcaactccatccgcagagcatcagc
cacaccgtcaacacatag
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