Cyprinus carpio (common carp): 109059194
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Entry
109059194 CDS
T05134
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109059194
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Other basic domains
RF-X
109059194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
109059194
NCBI-ProteinID:
XP_042631355
Ensembl:
ENSCCRG00000052061
UniProt:
A0A9Q9Z4Q6
LinkDB
All DBs
Position
A18:21791837..21814110
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AA seq
735 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRFSSHSSIGNMSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPSVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK
QTLYTMEDSREDQRRLIIQFYQEFDRLLEDQSPIEAYMEWLDSMVERCVVRVAGKRPGCL
KRVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRAMKGEGTPADSREELMLMGSTPTSTSPGPYSPAKSVHSVGVPAVVSPNSAQSPEGTSI
SATTGAVQSYTWSLTYTVTTSGGSPPETGSQLSCMRGGPPLHGSSSAHRMPVYPHRDEHG
YTGSYNYSSYANQHHHAIQSQYSSLTHEPGLPTPLHYSSYHRTSAQYPLNSQMSRMESCL
MGGSPLLHSSAVTPRWPDMPAANSCYSSPTVHTSRYSTGDMYSPLAPRRNSEYEHAQHFP
GFAYINGEATTGWAK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaagagcctgacatggattccacagagagctggattgaaaga
tgtctgaacgaaagcgagagcaagcggttctccagccactcttctattggaaatatgtcc
aacgacgaaaacgaggagaaggagaacaaccgagcatctaagccacattcaacacctgcc
acattacaatggttggaggagaactatgagatcgcagagggtgtttgtattcctcgcagt
gcactgtacatgcattatttggacttctgcgagaaacttgattctcagccagtcaacgct
gcaagcttcgggaagataataagacaacagtttcctcagttaaccacacggaggctagga
accagaggccagtcaaagtatcactactatggaatcgctgtaaaagagagctctcagtac
tacgatgtgatgtactctaaaaagggcgctgcgtgggtgaacgagacgggcaagaaagag
gtcaccaaacagacagtggcgtattcaccgcgctccaagctgggcactctcctgccagaa
tttccaaatgtcaaagacttaaatctgcccgccagtctgccagaggagaaggtctcaacc
tttatcatgatgtacagaactcactgccagaggatactggatacggtcatacgagccaac
tttgatgaggtccagagcttcctgttgcacttttggcaaggcatgccgccacacatgctc
cctgtcctgggctcttctacagtggtgaacatagttggtgtgtgtgactccatattgtac
aaggccatctcaggagtactcatgccctccgtccttcaggctctgcctgacagcctcact
caggtgatcaggaagtttgccaagcagctggacgagtggctgaaggtggcattacatgac
ttgcctgagaacttgcgcaacataaagtttgaattgtcaagaagattttcccagatactt
aaacgacagacatcattaaaccatctctgtcaggcatctcgaactgtgatccacagtgca
gacatcacctttcagatgcttgaggactggaggaacgtagaccttaacagcatcactaaa
cagactctatatacaatggaagactccagagaggaccagaggagacttatcatccaattt
tatcaagaatttgacagactgctggaggaccagtcccccattgaagcctacatggaatgg
ctggactctatggtggagagatgtgtcgtgagggtggcggggaagagacccggatgtttg
aagagggtagctcagcagttcctgctcatgtggtcgtgtttcgggaccagagtcatccgg
gatatgacgctgcatagcgcacccagcttcggctcattccatctgatccacctcatgttt
gatgactacgtactatacctgcttgagtctctgcactgccaagagagagccaatgaactc
atgagggctatgaaaggagaggggacaccagcagattccagggaagagctgatgcttatg
ggctccaccccaacatctacgtcacctggaccttactctccagccaaatctgttcactca
gtgggtgtaccagcagtagtatcccccaattcagcccagtctccagagggcaccagcata
tcagctaccacaggagctgttcagtcatatacctggtcccttacatacacagtgacaacc
tcaggtggcagcccacccgagaccggatcccagctttcctgcatgagaggtggaccccct
ctacacggctcctcatctgcccacaggatgccagtttacccacatcgggatgaacatggc
tatactggcagctataattacagcagctacgcaaaccagcaccatcatgcaatccagagt
cagtattccagtttaacccatgaaccagggctgcccacccctctgcactattcatcatac
caccggacctcagcacagtatccactcaacagccagatgtccagaatggagtcctgtttg
atgggtgggtctccgcttctacactcgagcgcggtgaccccccgatggccggatatgccc
gcggcaaacagctgttactccagccccactgtccacacgtcacgctactccaccggagac
atgtactcccctctcgccccgcgcagaaactctgaatatgaacatgcacaacattttcca
ggattcgcctatattaatggggaggcaacgactgggtgggcaaaatga
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