Cyprinus carpio (common carp): 109060138
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Entry
109060138 CDS
T05134
Symbol
med13b
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109060138 (med13b)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
109060138 (med13b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
109060138
NCBI-ProteinID:
XP_042595334
Ensembl:
ENSCCRG00000037697
ENSCCRG00000042233
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All DBs
Position
B15:complement(14992684..15023644)
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AA seq
2124 aa
AA seq
DB search
MMSSCFVPNGASLEDCHSNLFCLADLTGIKWKCFVWQGPTLSPILFPVTEEDPILCSFSR
CLKADVLSVWRRHQTPGRRELWIFWWGDDPNFAELVHHDLSCNEDGSWDSGLTYECRTLL
FKAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFVHGDSNVCTSVE
INQHQPVYLLSEEHLTLAQQSSSSVQVILSPYGLSGTLTGQSFKLSDPPTQKLIEEWKQF
YPIGPNTKEVADDKMDDLDWEDDSLAAVEVVVAGVRMVYPASLVLVAQSDIPVMATVSSF
TSSGSYSGGQHSHMVHGDTGISSVTLTPPTSPEEAQAVSQPAQKWVKLSAMSGAFSVDSS
SHHGGKIPRRFASQMVERVWQECNINRAQNKRKFSTMSNGVGEEETDKASVWDFVESSQR
SQCSCSRLKNQKQRACSTPGHPPSAGQPPQPSSKHKMAEKLEKGDKQQKRPQTPFHHRNS
LCEEQPNMEQGDAVHRLCLQGHEDSHYPSLHHADVTSSKTPMMHSSTDEMAGSPQPPPLS
PHPCERGEETADGLKTSSSPLHQHFYPSSSEPCLVPQKPPDDPPLDPLPLPCPPPYPESL
EATVYVGSAINPNEDTTHNPWRYFRVPGGRNADFHTPQLPVVRLYEDGYRAGGQDGVVSV
TEFMSSSKRPLKVSEDLVKMYEQKKNQHLSAAVCDGDQERESDPYAFVEGDEEFTFSDKD
KKPGAEREPGKKNKRDDGSVSSSDDAQGSGGSKPLPITSLIHETDLVVSINDLDNLFNSD
EDDLTPGSRRAAGGAEEKFGGKEPKPAAPDPLPCSADLHQMFPTPPSLEQHIIMGYSPIN
MGNTESAAGLSLLDGAISGNFKMEVEEGFCSPKPSEIKDFSYVFKPESCQALIGCSLYAP
LKMLPSQYLLPIKLPEECVYRPSWTVGKLEMLQPMAAMTFLNKDSNIPSVGSALEQDQSC
TPQTHNTFMSNSAPPSNSGAGILPSPATPRISAPTPRTPRTPRTPRGPASVQGSLKYENS
DLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCICVCN
MDITGADVGVYISDPNMDSQYSSLDPCSCGFSAVMNRRYGNGAGLFLEDELDIMGRGSDA
GRETEKHFEAVRTASLQRGVALKEQVPDDLILLLQDLCTNPFSPIIRPEHPSTSLKRPMR
LEERDYYSDCYLALEHGRQFMDNMSGGKVDETLVKSSSLHHWAKRNAFDMNMLFSQDVLR
MLLSLQPVLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTLLVGN
EYDFVVLSPFALPYWEKLLLDPYSSQRDIGYMVVCPDNEALLNGARTFFRDLTAVYESCR
LGQHRPIAKSHADGIVTVSDTGSKALTDQTLADWLPKTINSSSEVFNKLKLYAQVCRHDL
ASILASQSLDSSLLSQRNPTSSTQPSSSGSPVTAAQNATPSTNSTSNTNTTTTTTTSSSC
SQGIGTMPSSKPNSLPSFGGLQSSQPSGGQSAGTLGDGTSATSQPQVQSEPVESTMEREK
VGVPTDGDSHAVTYPPAIVIYIVNPFSYEETGQGGSSSVWTMGLLRCYLEMLQSLPAHIR
NAVYVQIIPSQYLLQPVWSEERHIYAQHLKSLAFSVYTQCRRRLPTSTNVKTLTGFGPGL
AIDTALQSKERPECLHLYAPPFVLAPVKDKQTELGETFGEAAQKYNVLFVAYCLSHDQRW
LLASCTDQYGELLETCVISIDVPNRARRKKGSARRQGLQKLWEWCLGLVQMTSLPWRIVI
GRLGRIGHGELRDWSIMLSRRNLQSLSRRLKEMCRMCGISAADSPSILSTCLVAMEPQAS
FVIMPDSVSTGSVFGRSTTLNMQSQLNTPQDTSCTHILVFPTSAGLQAFNPNNGQTPQAL
LLIACVYSKLIYVLIVFADVTDGMGGMDGILDLLAENDLVDPDLINILPNSPTTSPVQSP
GSHYHHGGDGSKGQGTDRMESHDESPNILQQPMALGYFVSTAKAGPLPDWFWSSCPQAKN
QCPLFLKASLHLNVSSVQSDELLHSKHSHPLDSSHTSDVLRFVLEQYNALSWLTCDPATQ
DRRSCLPVHFVVLNQMHNFIMNML
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttcttgttttgtacccaacggggcgagcctggaggactgccactccaacctc
ttctgtctggctgacctcaccgggatcaaatggaagtgttttgtgtggcagggccccacc
ttgtcccccatcctcttcccggtgacggaggaggaccccatcctgtgcagcttcagtcgc
tgcctgaaggcagacgtgctgagcgtttggcggaggcaccagaccccgggccggcgggag
ctctggatcttttggtggggagacgaccccaactttgccgaactcgtccaccatgaccta
tcatgtaatgaggacggttcgtgggatagcggcctgacctacgagtgccgaaccctgctc
ttcaaagccatccataacctgctggagcgctgccttatgaaccgatccttcgttcgtatc
ggcaagtggttcgtcaaaccctacgagaaggatgagaagcccatcaacaaaagtgagcac
ctgtcctgctccttcacgttcttcgtacatggagacagtaacgtgtgcaccagcgtggag
attaaccagcatcagcctgtctatctgttgagtgaggagcacctgactttggcccagcag
agcagcagctcggttcaagtgatcctctctccgtacggtttgagtgggactctgacgggc
cagtccttcaagctgtcagatccaccgacccagaagttgatcgaagaatggaagcagttc
tatcccataggccccaacaccaaggaggtcgcggacgacaagatggatgacctcgactgg
gaggacgattccttggctgctgtagaggttgttgttgctggagtgaggatggtgtaccca
gccagcctggtgctggtggcccagtctgacatcccggtcatggctacagtgagctctttc
acctcctcgggctcttactcaggaggtcaacacagtcacatggtccatggagatactggc
atctcttcagtcactctgactcctcccacttcacctgaggaggctcaagcagtttctcag
cctgcccagaaatgggtgaaactctcagctatgtcaggcgcctttagtgtggacagcagc
agtcatcacggaggcaagatcccccgccggtttgccagccaaatggtggagcgagtctgg
caggagtgcaatattaaccgagcccagaacaagagaaagttttcaaccatgtctaacgga
gttggcgaggaagaaacggacaaagcttctgtttgggactttgtagagtcgtctcagagg
tcacaatgcagttgctcaaggcttaagaaccagaaacagcgggcatgtagcaccccaggg
catcctccatctgctggccagcctcctcagccctctagcaaacacaagatggcggagaag
ctggagaaaggagacaagcagcagaagaggccacagacccccttccaccaccgcaactct
ctgtgtgaagagcagcccaacatggagcagggagatgctgttcacaggctgtgtctgcag
ggccatgaggacagccactaccccagcctccatcatgccgacgtcacctccagcaagacc
ccaatgatgcacagctcaactgatgagatggccggctcccctcagcccccgccgctcagc
ccgcacccttgtgagcgcggagaggagacggccgatggcctaaagacttcctcctctccc
ttgcaccaacacttctacccttcttcatctgagccctgcctggtgccccagaagccccct
gatgatcctccactagacccattgcccttgccctgcccacctccatacccagagtcccta
gaagccaccgtatatgtgggctctgccataaaccccaacgaggacacaacgcataacccc
tggaggtactttagggtgcctggtgggaggaacgcggatttccacacacctcagcttcct
gtggtcaggctttatgaggatggttacagggccggaggccaggatggtgttgtgtcagtt
acagagtttatgtcctcctccaaaaggcctctgaaagtgtcggaagacctggtgaagatg
tacgagcaaaagaaaaaccagcatctctctgcagctgtgtgcgatggagaccaggagcgt
gaatctgatccttatgctttcgtggaaggagatgaggagtttactttctctgataaagac
aaaaagcctggagccgagagggagcctgggaagaaaaataagagggatgatggcagtgtg
tcatcttctgatgatgcccaggggtcaggtggcagtaaaccacttcctatcaccagcttg
attcatgagacagatctggtcgtgtccattaatgacctggacaacctctttaactctgac
gaggatgacctgacgcctggatccaggagagctgctggtggagcagaggaaaaatttggt
gggaaagaaccaaaacctgcagcgccagaccccctgccttgctctgcagacctgcaccag
atgttcccaacccctccgtcactagagcagcacatcatcatgggctactctcctataaac
atgggcaatacagaatcagcagctggcctttctctcctggatggggccatcagcgggaac
ttcaagatggaggtggaggagggtttctgcagccccaaaccctcagagattaaggacttc
tcctacgtgtttaaaccagagtcctgccaagcgctcatcggctgctccctttacgcccct
ctgaagatgctgcccagccagtatctgcttcccatcaagcttccagaagagtgtgtgtac
cggcccagctggacagtcggcaaactggagatgctgcagccgatggcagccatgaccttc
ctcaacaaggacagtaacatccctagtgtaggaagtgcattggagcaggaccagagctgc
acccctcagacacacaacacctttatgtctaacagcgccccgcccagcaacagcggcgct
ggcatcctgccctcccctgccacccctcgaatctctgccccgacgccacggacaccccgg
accccacgcacacccagaggccctgccagcgtccaaggctcgctgaaatacgagaactcc
gacctctactctcccgcctctacgccttccacctgcagacctttaaattcggtagagccg
gccaccgtgccttccatcccggaagctcacagcctatacgtcaccctcatcctctccgag
tcagtcatgaacctcttcaaggactgcaactttgacagctgttgcatctgcgtctgcaac
atggacattacgggggcggatgtgggcgtctacatcagcgatcccaacatggattcgcag
tactcaagtttggacccctgctcctgcggttttagcgctgtcatgaaccgtcgctatggc
aacggggcaggcctctttctggaggacgagctggatatcatgggacggggttcggatgcc
ggacgcgagactgagaagcactttgaggctgtacgcacagcctcccttcagagaggggtg
gcccttaaagagcaggtcccggatgatctaatcctcctgctgcaggatctgtgcactaac
cccttctccccaatcatcaggccagaacatcccagcaccagtctcaagcgtcctatgcgc
ctggaggagagggactattacagtgactgttatttagctctggagcacggcagacagttc
atggacaacatgtctggaggaaaagtcgatgagacgctggtcaagagctcctctttacac
cactgggccaaacgcaacgctttcgatatgaacatgctgttctcccaggacgtgctgagg
atgctgctgtcgctgcagcctgttctgcaggacaccatccagaagaagaggtcggtgcgc
tcttggggagtccaaggccccctcacctggcagcagttccacaagatggctggcagggga
tcgtacggtacagatgaatctccagagcccctccccatccccaccttactggtgggtaat
gagtatgacttcgtggtgctgtctccttttgctctgccatactgggagaagcttctgctg
gacccctacagctctcagcgggatatcggatacatggtcgtgtgtcctgacaatgaagcc
ctgcttaatggagccagaactttcttcagagatttgacagctgtatatgagtcctgtcgg
ctcggtcagcacaggcccatcgccaagtctcatgctgatggcattgtgacggtgagcgat
actggatccaaagctctcacagaccagactctcgctgactggctcccaaaaaccatcaat
agcagcagcgaggtgtttaacaagctcaaactctacgcacaagtgtgccgtcacgacttg
gcgtccattctggcatcccagtctttggacagctcactgctttcccagcgaaacccaacc
agctctacacaaccttccagctctggcagcccagtaacggcagctcagaacgccacccca
tccaccaacagcacctccaacactaacaccactaccaccaccaccacctcttcctcctgc
tctcagggcataggcaccatgccgtcttccaagcccaactcactgccttctttcgggggc
ttgcagtccagccagccgagtggtggtcagagtgcagggactctgggggatggcacatca
gccaccagccaacctcaggtccagtctgagcctgtagagagcacaatggagagagagaag
gtgggggtgccgactgacggagactcccacgctgtcacctatcctcccgctatagtgatc
tacattgtaaacccgttcagctatgaggagacaggccaaggcggcagttctagtgtgtgg
acgatgggccttcttcgctgttatctagagatgcttcagtctcttcccgctcacatcagg
aatgccgtatatgtccaaattatacccagccagtacttactgcagccggtctggagtgag
gagcgccatatatatgcacagcacctgaagtctctggctttctcagtttacactcagtgc
agacggcgtctgccaacctccactaacgtcaaaacgctaacaggcttcggccctggcctg
gccattgacactgcactacagagcaaagagagaccagagtgtttacatctctacgcaccg
ccattcgtcctggcaccagtgaaggacaaacagacagagctgggtgagactttcggagag
gctgcccagaaatacaacgtgctgtttgtggcctactgcctgtcacatgaccagaggtgg
ctcctggcttcatgcacagaccagtacggagagctgctggaaacctgcgtcatcagcatc
gacgtacccaaccgagctcggaggaaaaagggctctgcacgacgacagggccttcagaag
ctttgggaatggtgcctgggccttgtacagatgacctcacttccttggcgcattgtgatt
ggccggctcggaaggataggtcacggggagttacgtgattggagtattatgttgagtagg
cgaaacttgcagtctctcagcagacgactgaaggaaatgtgcaggatgtgcggcatctct
gccgcggacagtcccagcatcctcagtacctgtctagtcgccatggaaccacaggcttcc
tttgtcatcatgccagactcagtgtccacgggctccgtgtttggccgcagcacgaccctg
aacatgcagtcgcagttaaacactcctcaggacacctcctgcactcacatcctcgtgttc
cccacttctgccggcctccaggccttcaaccccaacaacggtcagacaccacaagcactt
ctacttattgcttgtgtttatagcaagctaatatatgttctcattgtgtttgcagatgtc
acagatggcatgggcggcatggatgggatcttagacctgctggcagagaatgacctggtt
gatcctgatctcattaacatcctacccaactctcccaccacctccccagtacagtcgcca
ggctcacattaccaccacggaggagatggcagcaagggccagggcacagacaggatggag
tctcacgacgagtctcccaacatcctccagcagcccatggctctgggttactttgtgtcc
acggctaaagccggcccactgcctgactggttctggtcatcctgcccacaggcaaagaac
caatgtcctctcttcctgaaggcttctctgcaccttaatgtttcgtcagtgcagtcagat
gagttgctgcacagtaaacactctcaccctctggactccagccatacctcagatgtgctc
agatttgtgctggaacagtataacgccttgtcatggctgacctgtgacccagcgactcag
gaccggcgctcttgtctgcccgtgcactttgttgtgctcaaccagatgcacaacttcata
atgaacatgctctaa
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