Cyprinus carpio (common carp): 109060257
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Entry
109060257 CDS
T05134
Name
(RefSeq) MHC class II transactivator-like isoform X2
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccar01001
]
109060257
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109060257
Enzymes [BR:
ccar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109060257
Protein kinases [BR:
ccar01001
]
Serine/threonine kinases: Other
TAF1 family
109060257
Pattern recognition receptors [BR:
ccar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109060257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
nSTAND_NTPase5
LRR_8
AAA_25
Pox_A32
TsaE
ABC_tran
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
109060257
NCBI-ProteinID:
XP_018932956
Ensembl:
ENSCCRG00000040841
UniProt:
A0A9Q9V2I5
LinkDB
All DBs
Position
B3:25509826..25526641
Genome browser
AA seq
1054 aa
AA seq
DB search
MEYQCETDAEWQDIAPDLMSELLPDNIISKYLESPESIEDDFDPTVLDNFPGDISTTCMP
IPEDATFLDGVPAKKPKVVHKRRRKRGNSTANRKATVCPESPSNGSTPTIAPESSFHLSP
TPFQHVLRIPFSPPLLPPSGGSPLQIIQTIGPYTPPLFGTVVPTGPTYVIVSPQCVSPGA
QIFPLSPATGTVAPPELTGSVLPVGSSSDSACQGSPTVDTLSPTKDLQKHNDSTSPKAEK
KIRPEAPECVKDYIHHTQSYMRDVCCSMRGGMGMESHYVDAHLVQRKLLIKSGKNANKCL
EKELVVLSDSERKKAKLDRSQLFHNSDSKPKQSFALLGKAGAGKTTFIQRLCLDWASGSL
PQFQFVFLLNCKILDLTQSNCSLKGLLLDLSMSPRCEDSDSVFKHILSCPDEVLIIFDSF
DHIKDFEGLLQSPAKSHTNTKYTIKQLFSGLFQKEILSGCTLLIATRPKDVLNQVLRKMD
SLLELCGFSPEDIELYTSKYFGDNTSLQESALKQIKNDRYIFSLCSNPLLCWTTCFLLEH
QESGNDLPSTLTDLYQRATSKHLQLASLENSSLCKNRKLLDIPQLCKMAWEGFKNHDTHV
NPASSTELLDCALKSGILTSFKTSECQKNHFADLFTQNLLSAVHLVQSKQVNEKMVVANS
VVHQKKRKVQGESQDVLQRFVTGLVFQKAPDGVSILDSSVNIKAKRKAVETHLESMKPND
LLPARLLELFHCVYETSSAKFAKLLLKNLPDNLSFYGTQLCPSDVYVICHLLQYASTLKR
TFSINLQDTCIPISGLKELVGLQCIKAFWAHTADTIGLWEDLHRSNDELNLKSAIEKFTL
HPFKATEGYHIESLPVLVQIHREKKLPMSEPVSALDEGVPALRHLQRLEFELGVQNGPEL
FPKLVEALPSLESLQHLDLEKNQIGDSGAEKLAGVLHYLKCLKLLNLSQNLIGDAGVEKL
AKALASVPSLQSLSLYGNAIADIGAEHLALALPDMNFLLDLNIAFNKFTDLGAKKLGAAL
KNCTGMKSLELWNDCIPYGVFEHLRLQDPRIRSL
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcaatgtgaaacagatgccgaatggcaagatattgccccagacttaatgtct
gaactcttacctgataatatcatctcaaaatatctcgagtcacccgagtctattgaagat
gatttcgatcccaccgtccttgataactttccaggtgacataagtacaacctgcatgcca
ataccagaagatgctactttcctagatggagtgccagccaaaaagccaaaagttgtacac
aaacgccgcagaaaacgaggtaattcaactgctaatagaaaagcaacagtgtgccctgaa
agtccctcaaacggaagtacgcccaccattgcccctgagagtagtttccatctgagccca
accccattccagcatgtattgcgtattcctttcagcccccctcttctgccccctagtgga
ggttcaccactacaaatcatccagacaatcggcccttatacgccgcctctattcggcact
gtggttccaacagggcctacatacgtgattgtgtcaccccagtgtgtgagtccgggagct
cagatatttcctctttcacctgccactggcacagttgccccgccagaactcactggttct
gtacttcctgttggctcatcctcagacagcgcatgccagggttcgccaacagtagacaca
ctctcccctacaaaagacctacaaaaacacaatgattccacatctccaaaagcagaaaag
aaaatccgcccggaagcaccagaatgtgttaaggactacatacatcacacacagtcctac
atgagagatgtctgctgctcaatgcgtgggggaatgggaatggaatcacactacgtggac
gcacatctggtccagagaaaactccttatcaaatccggcaagaatgcaaacaagtgtctg
gagaaagaactggtcgtccttagtgattcagagcgaaagaaagcaaagctggacagaagc
cagttgtttcataacagtgattccaaaccaaaacagtcattcgctctccttggaaaagcc
ggagcggggaaaaccacgttcattcagcgtttatgcttggactgggcgagcggcagcctg
cctcaatttcagtttgtttttttgttgaactgtaaaattttagacctcacacaatctaac
tgcagcttgaaaggtttactgttggatttgtctatgtctcctcgctgcgaggactcagac
tctgtgttcaaacacattctgtcctgccctgatgaagttctcattatcttcgacagcttt
gatcacattaaagactttgaagggcttctccagtcccctgctaaatcacacacaaacact
aaatacacaatcaaacagctattttctggtttgttccaaaaggaaatcctctcaggctgc
acgcttctcatcgccacaaggccgaaagacgttttaaatcaggtgctgcgaaaaatggac
agccttttggagctttgtggcttctctcctgaggacattgagttgtatacgtcaaaatat
ttcggggataacacttccctccaagaaagtgcactaaaacagattaagaatgacagatac
atattcagtttatgctccaacccgctgctttgttggactacctgcttcctgctcgagcac
caagagagcggcaatgatttgccttcaaccctcacggatttgtaccaaagagcgacctca
aagcacctgcaactagctagccttgaaaatagctcattgtgtaaaaacagaaaactgctg
gacatcccacaattgtgcaaaatggcatgggagggattcaagaatcatgatacacatgta
aaccctgccagttctacagagctgctggactgcgctcttaaaagtggcatacttacatcc
ttcaaaacatctgagtgtcagaaaaaccactttgcagaccttttcactcagaacctcctg
agcgctgtgcatctggtacagtctaaacaggtgaacgaaaaaatggtggtggcaaacagc
gtagtccatcagaagaaacgaaaggttcagggagagtcgcaggacgtgctgcaaaggttt
gtcacgggcttggtcttccagaaggcccctgatggagtcagcatcctggacagcagtgtc
aacataaaagccaaaagaaaggctgtcgaaacccatctggagagcatgaagcctaatgat
ttgcttcctgcaaggttgctagaactgtttcattgtgtttacgagaccagcagcgccaaa
tttgccaaactgctgttgaagaacctgcctgacaatctgtcattctatgggacgcagctt
tgcccatcggacgtgtacgtgatatgccacctccttcagtatgccagcacgctgaagcgg
accttctccattaacctgcaagatacatgcattcccatcagtggcctgaaagagcttgtg
ggactccaatgtatcaaagcattttgggcacatacagcagacaccattggcttatgggag
gacttgcatcgaagcaatgatgaactgaacctgaaaagtgccattgagaaattcaccttg
cacccattcaaggcaacggaagggtatcacatagagagcctgcctgtccttgtccaaatt
cacagagagaagaagctaccaatgagtgaacctgtgtctgcactggatgaaggtgtgcca
gccctccggcatcttcagagactggaatttgaacttggagtccagaatggtcctgaactt
ttccctaaactggtagaggccctgccttctcttgagtctctccaacatctggaccttgag
aaaaaccaaataggagactctggggctgagaagctagctggcgttttacattatttgaaa
tgtctgaaattgctaaatctgtctcaaaacctcattggagatgcaggagtggagaaacta
gctaaagctttggcatcagtcccttctctacagagcctcagcctttacggaaatgcaatt
gctgacattggagctgaacatctggccttggctttaccagacatgaattttctgctggac
ctgaacattgcgttcaacaagttcacagaccttggagctaaaaagcttggtgctgctctg
aaaaactgcacaggaatgaagtccttggagctgtggaatgattgcattccatatggagtt
tttgaacacctccgtcttcaagatccacggataagatcactttga
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