Cyprinus carpio (common carp): 109060601
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Entry
109060601 CDS
T05134
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109060601 (ctr9)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
109060601 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_10
TPR_17
TPR_7
TPR_11
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
109060601
NCBI-ProteinID:
XP_042616997
Ensembl:
ENSCCRG00000030416
UniProt:
A0A9Q9YB70
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All DBs
Position
A7:complement(37913289..37928098)
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AA seq
1159 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKDLINQSTLLYTMA
DKIIMYDQSHLLGRACFCLLEGDKMDQADAQFQFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKEHLKKITVQHSDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYFREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLRARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
HRAKQEQERDLLRQQMLKEQEERKSKEAEEQKKLLEQRAQYVEKTKGLLNFSETMKAAKE
KKKGGSGRRKKGGDFDDFVNDDSDEDLPVKKKKKKKAESGSEVEDAEEDGEKKPRKKRRR
PAKREDEGSDDEEGGSRPKKQRKPRERKKIEKPERMPPSLKGKIKSKAIISSSDSSSDED
GLKIAEERNPRDSGSGSDEDEGHRKRIASDSDSNEERNRSASEAGSPQRSGNSDEDESGS
ERPVKRRRPQQQSDSEQSDNESKKSRSEGSDDESQAGSPAAASDRGSENEGSPQRSDNDS
EPEGSNNEASNRGSDDDSD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatccattgaaatccctctgcgggacacagatgaggttatcgagcttgac
tttgaccagcttccagaaggagatgaagtcatcagtatcctcaaacaggaacacacacag
ctgcacatatggattgcgctcgctttggagtactacaagcaaggcaagacggaggatttt
gtcaagttgctggaggcggcgcgcattgatggaaacctcgattacagagaccacgagaaa
gaccagatgacgtgtttggacacactggcagcttattatgttcagcaggctcgaaaagag
aagaacaaggatgcaaagaaggacctcatcaaccagtccactcttctgtacaccatggca
gacaagatcatcatgtatgatcagagccatctgctcggaagagcttgcttttgtcttctg
gaaggagataagatggatcaggcagacgctcagtttcagtttgtacttaaccagtcaaca
aacaacatccctgcactcctgggtaaggcgtgtatctccttcaacaaaaaggattacaga
ggagctctagcctactacaaaaaagctcttcgcactaaccctggctgtccagccgaggtg
agactaggcatgggccactgctttgtcaagctcaacaaactagagaaagctcgactggca
ttcggcagagccctggagctcaactccaaatgtgtgggagctttggtgggtttggctgtg
ctggagctcaacaacaaagaggccgactccatcaagaacggggtgcagctgctttccaga
gcctacaccattgaccccagcaaccccatggtgctcaatcacctcgccaaccatttcttc
ttcaagaaggactacagcaaagtccagcatctggctctccatgcttttcacaacaccgag
gtggaggctatgcaagcggagagctgctatcagttagctcgttccttccacgtccaggag
gactacgaccaggccttccagtactactatcaggccactcagtttgcgtcgtctactttt
gtactgcccttctttggcctggggcagatgtatgtatatcgtagagacaaggagaatgct
gcacagtgctttgaaaaggtcctgaaggcttatcccaacaattatgaaaccatgaaaatc
cttgggtctctttatgccacatcggatgaccaggagaagagagacattgctaaggaacat
ctaaaaaaaatcacagtgcaacattctgatgatgtggaagcctggattgagctcgcccag
attttggaacaaacagacattcagggtgctctttctgcatatggcacggccactcgtatc
ctccaggagaaggtccaagcggatgttcctcctgagatcctcaataatttgggggcttta
cacttcagattgggaaaccttggcgaagctaagaaatacttcttggcttctttggagagg
gcaaaagctgagggcgagcatgatgagcactactacaacgccatctccgtcacaacctcc
tataacctggccagactgtatgaagccatgtgcgagttccacgaggctgagaaactctac
aagaacatcttgagagagcatcccaactatgtcgactgttacttgcgacttggagcgatg
gcacgtgataaggggaatttctacgaagcttccgactggtttaaagaagcccttcagatc
aatcaggaccatcccgacgcctggtcactgattggtaaccttcacttggcgaagcaagag
tggggtcccgggcagaagaagtttgaacgcatccttaagcagccctccacacagaacgac
acctactcgatgctggcgctgggaaacgtgtggcttcagacgctgcatcagcccactaga
gaccgagaaaaggaaaagcggcaccaggatcgagctttggcgatctacaaacaagttctg
aggaatgactccaaaaatctgtatgctgccaatggcataggtgctgtgttggcacacaag
ggttatttccgagaggcacgggatgttttcgcccaggtccgagaggccacggcagagatc
agtgatgtctggttgaatctcgcacacatctatgtggagcagaagcagtacatcagtgca
gtgcagatgtatgaaaactgtttgaagaaattctacaaacatcagaacacagaggtgctg
ctgtatctggcccgagcgctcttcaaatgtggcaagctgcaggagtgtaaacagactctt
ctgagggcccggcatgtggctcccagtgacacagtgctgatgtttaatgtggcgctggtg
ctgcagaggttggccacgctggtgctgaaggacgagaagagtaatctgaaggctgtattg
agtgcggtgaaagagctggagttggctcataggtacttcagctacctcagtaaggctggg
gacaaaatgagattcgaccttgcgctggctgcaagcgaagccaggcagtgctctgatttg
ctaagccaggctcaataccatgtggcccgagctcggaaacaagatgaggaggagaaggag
caccgcgccaaacaagagcaggagagagacctgctgcggcagcagatgctgaaagaacag
gaggagaggaagagcaaagaggccgaggagcagaagaagctgctggagcagagagcccaa
tatgtggagaagaccaagggcctgctcaacttctcagagacgatgaaagcagcaaaggag
aagaagaaaggaggcagtggacggcgcaagaaaggaggcgactttgatgactttgtcaat
gatgactctgatgaggacctgccagtcaagaaaaagaagaagaagaaagctgagagtggt
agtgaagttgaggatgccgaggaggatggagagaagaaaccccgtaaaaagaggaggaga
ccagctaaaagagaagatgaaggttcagatgatgaggaaggaggttcaagacctaaaaag
cagcgcaagcccagagagcgcaagaagatcgagaagccggagcgcatgccaccgtctctt
aaagggaagatcaagtccaaggcaatcatttcatcctctgattcctcctccgatgaggat
ggcctgaaaatagcagaagaaagaaaccccagggacagcggctctggttcagacgaagac
gaaggccacaggaaacgcatcgcttctgacagcgattccaacgaggagcgtaaccggtcg
gccagtgaggccggcagcccccagcgctctggaaactcagatgaggatgagtctggcagc
gaacgcccggtgaagaggagaagaccacaacaacagtccgactctgagcagtcagacaac
gagagcaagaagagccgctccgaagggtctgacgatgagtctcaggccggatctccagct
gccgcttcagatcgaggctcggagaacgaaggctctccgcagaggtctgataacgactct
gagccggaggggtccaacaatgaagcctctaacagaggatctgatgatgacagtgactga
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integrated database retrieval system
