Cyprinus carpio (common carp): 109060938
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Entry
109060938 CDS
T05134
Symbol
ube4b
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04120
Ubiquitin mediated proteolysis
ccar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109060938 (ube4b)
04120 Ubiquitin mediated proteolysis
109060938 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109060938 (ube4b)
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109060938 (ube4b)
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
U-box type E3
109060938 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
109060938
NCBI-ProteinID:
XP_018933628
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGASSQPVPPAP
SHTLGLNAQNVTPATSPVGASGKCCADFIIQKDSARIMSQVDVDSGIENMEVEESDRSEK
RNLAEKDSSSSSDVSEEQALHLICKILRVSWKEQDRDVIFLPSLAAEFQKNPGDVYSDFR
DLIGQILMEALMMSTRSRDCNPFASLTATSQPITAARSPDCHLTLVPPSSQSGSPMMPCA
GSFGASSLSSLYGCSPNPLALSSARMSAPSPFPHDTVAPTPPCLSPLLPGSPSTMARRTA
LAARMPSSPFSLLFFGMSDLPQDSSDEELEEEEDEDFSGVQFGSRYQCQRVLHASVDKFS
VSSVDRALLSAEIVFIAQGFVRPVKLTAEIFISHGDSGNDRFTIESCKETEMLNYLIERF
DSVGMEERKALKMCSQPAVSQLLSNIRSQCISHAALVLQGTLTQPRAPLQPSLLVPYMLC
RNLPYGFIQELVRMTHQEEDVFKQIFVPILQGLTLAVKECSFDSDNFKFPLMALVELCEI
KFGKTHPVCNLITSLPLWCPDPLSPGTGREIQRLSFLGAFFSLSVFAEDDTKVGDKFFSG
PAITVENTRVVSQSLQHYLESARGDLFKILHNILLNGETREAALSYMAALVNRNVKKAQM
QTDDKLVSTDGFMMNFLWVLQQLSMKIKLDTVDALYIFHPKCRLNVSTEETRLNATMEDL
KSWLSELHEDPSKFSEPKFPTECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNRTVEELK
NSENQWKDSPLASRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQFFSMVIQLI
LRMVEPAYPGVTLPLNPEIPKCFAALPEFYIEDVAEFLLFIVQYFPQVLYETCTEDIVTF
LVVFISSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEMMENHPLSINQLVPALMKFY
TDVEHTGATSEFYDKFTIRYHISTIFKSLWQNINHQGTFLEEFNSGKQFVRYINMLINDT
TFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQSRQSQLTQDERVSRSYLALATETV
DMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQ
LTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEI
VARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRAIILRHLLNSPTDPFNRQP
LTESMLEPVPELKKRIQAWMREKQSGRV
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcctgaagagatccgtagaaggcgactggcccggttagctggaggg
cagacgtcacagcccagcacccccctcagcacccctttgacatctccacagagagagact
cccccaggacccttgccagggccctccggggcctcttcacagcctgtcccaccagctcca
tctcacactctgggcttaaatgcccaaaatgtcacccctgccacctctcctgtgggggcc
tcgggtaagtgctgtgctgactttatcattcaaaaagattcagcaaggatcatgtcccaa
gtagatgtggactcaggaattgagaatatggaggtggaagaaagtgatcgcagcgagaaa
aggaacctggctgaaaaggattcctcatccagttctgacgtctctgaagagcaggctttg
caccttatctgtaagatcttgcgtgtttcctggaaggagcaggaccgtgatgtcatcttc
ctcccctcacttgctgctgaattccagaagaaccctggagatgtttactctgacttcaga
gacctgattggacagattttaatggaggctctcatgatgtccacccgttcgcgtgactgt
aacccattcgccagcttgaccgccacatctcagccaattactgctgccagatccccggac
tgtcatctgactctagtcccaccctccagccagagcggcagtcccatgatgccctgcgct
ggttcattcggtgccagctctctttccagtctctacggttgtagcccaaacccactcgct
ctgagctctgccagaatgagtgctccttcacccttcccccacgacaccgtagcaccaact
cctccgtgcctttccccactcctccccggctcccccagcactatggccagaaggactgcg
ctagctgcccggatgccgtctagccctttctccctcctcttcttcggcatgtccgacttg
cctcaggacagcagtgatgaagagctggaggaagaggaagatgaggatttttcaggggtt
cagtttgggtccaggtatcagtgccaacgtgtgttgcatgcttcagttgacaaattcagt
gtttcttctgtggacagagctttgctgtcagctgaaatcgtgttcattgcacaaggattt
gttagacccgttaagctcactgcagaaatttttatctctcatggtgactcaggtaacgac
cgctttaccatagagtcctgtaaagagacggagatgctcaactacctcatcgagcgtttt
gacagtgtgggaatggaagagaggaaggccctaaagatgtgcagccagccagcagtcagt
cagctgcttagcaacattcgttcccagtgcatttcccatgctgcactagtgcttcaaggt
accctcacacagcccagggcccctctacagccctcgctgctggttccctacatgctgtgc
cggaaccttccgtacggcttcatccaggagttggtgcgcatgactcatcaggaggaggat
gtgtttaaacagatcttcgttcccattcttcaagggctcactttagctgtaaaagaatgt
tcttttgacagtgacaacttcaagttccctctaatggctttggttgagctctgtgaaatc
aagtttgggaagactcaccctgtatgcaatttgatcacctctctgccattgtggtgtcct
gaccctctcagtcccgggacaggaagagaaattcaaagactctcctttctcggcgcattc
ttcagtctttctgtgtttgcagaggatgacactaaagtgggagacaagttcttctccggc
cctgccatcactgtggagaacacccgtgtggtcagccagtcactgcagcattatctggag
tccgcgaggggagatctgtttaaaatcctgcacaacatcttgttgaacggagagacaagg
gaagcagctctgagctacatggcagctctggtgaatcgtaatgtgaagaaggctcaaatg
cagaccgatgataagctggtgtccaccgacggcttcatgatgaacttcctgtgggtgctg
cagcagctcagtatgaagatcaagctggatacagtggatgctctctacatcttccacccc
aagtgtcggctgaatgtcagcacggaagagacccggctcaatgccacgatggaggaccta
aagagctggctctctgagctgcatgaagacccatccaagttctccgagcccaagttccct
acagagtgctttttcttaacgctacacgcacatcatctgtccatccttccgtgctgtcgg
cgctacatacggaggctgagggccatcagggatctgaacagaactgtggaagagctgaaa
aacagtgagaaccagtggaaggattccccgttggcaagtcgtcatcgggagatgctgaag
agatgtaaaacacagctgaagaaactggtgcgctctaaagcctgcgcagacgcagggctg
ctggacgagaacctgctgcgcagatgtctgcagttcttcagtatggtcatccagctcatc
ttgcgtatggtggagcctgcctacccaggcgtaaccctgcctctgaacccagaaatcccc
aaatgctttgcagcactgccagagttttacattgaagatgtggccgagttcttgctattt
attgtgcagtactttccacaggttctctatgagacgtgcactgaagacattgtgaccttc
ctggtggtcttcattagcagtcagaattacataaagaacccatacttgatcgccaagctg
gtggaggtgctgtttgtcaccaatcctgcagtgcagccgcgcactcagcgattctttgag
atgatggagaatcacccactgtctatcaatcagcttgtgccagctctcatgaagttttac
accgatgtggagcacactggagccacaagcgagttctatgacaagttcaccatccgttac
cacatcagcaccatattcaaaagcctgtggcaaaacattaaccaccaaggcaccttcctg
gaggagttcaactctggtaaacagtttgtgcgctacatcaacatgctaattaacgataca
acttttctgctggacgagagtttggagtctctgaaacgcatccatgaggtccaggaggag
atgaagaataaagagcaatgggaccagctgcccagggatcagcagcagagccgacagtcc
cagctgactcaggatgagagagtatcacgatcgtacctggctttagccacagagacagtg
gatatgttccatatcctcaccaaacaggtccagaagcccttcctcaggcctgaactgggt
cctcgtctggctgccatgttgaattataacctgcagcagctatgtgggcctaaatgtcga
gacttgaaggtggaaaacccagaaaaatatggttttgagccaaagaagctcctggatcag
ctcactgacatttatctgcagctggactgtgcccgctttgctaaagccattgcagatgac
cagcgatcatacagcagggagctgtttgaggaggtcatttcaaaaatgagaaaagcgggc
ataaaatccaccattgctattgagaaattcaaactgctgttggagaaggtggaggagatc
gtagcccgcaattctcagtctgagatggattacagtgatgccccagatgagtttaaagac
ccactgatggacactctcatgactgatcctgtgcaacttccctctggcaacatcatggat
cgagccatcattctgcgacacctcctgaactctcccactgaccccttcaacagacagcct
ctcaccgagagcatgctggaaccagtcccagagctgaagaagcgcatccaggcctggatg
agagagaagcagagtggccgtgtttga
DBGET
integrated database retrieval system
