Cyprinus carpio (common carp): 109060964
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Entry
109060964 CDS
T05134
Name
(RefSeq) calsyntenin-1-like isoform X1
KO
K22659
calsyntenin 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109060964
Cell adhesion molecules [BR:
ccar04515
]
Cadherins
Cadherin related
109060964
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
PRIMA1
EphA2_TM
Cadherin_C_2
TMEM132_C
Cadherin_pro
TylF
FAM176
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
109060964
NCBI-ProteinID:
XP_042607060
Ensembl:
ENSCCRG00000024201
LinkDB
All DBs
Position
B23
Genome browser
AA seq
977 aa
AA seq
DB search
MRVRGVKPFASAVGLLLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTKEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRTKDKLDCELQKE
HTFTIQAYDCGEGPDGSNMKKSHKATVHIQVNDVNEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICSYEIVTPDVPFSVDKDGNIKNTEKLNYSKEHMYKLTVTAYDCG
KNRASEDVLVKISIKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCEEPITSIQASI
MLETNHIGKGCDRDTYSEKSLHKLCGASAGTVELLPAPSNSVNWTVGLPTDNGHDSDQVF
EFNGTQAIKVPEGVVSTTLKEPFTISVWMRHGPGSREKETILCNSDKTEMNRHHYSLYVH
NCRLVLLLRQEPTESENYKPAEFHWKLDQVCDKEWHHYVLNIEFPAVTLFVDGATFEPFL
VTEDYPLHASKIETQLTIGACWQDLSGHDNDTETLSEPLTGGSARMTQYFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASSVKVEFNPNQSSLSLEGDDIESFEKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEETCISVSDSEGYVMVLQPEEPKISLSGIDHFAR
GAAEFESTEGVTLFPELRIVSTITREVEVEAEAEAEAEDDPTVQETVVSEEIMHNLDTCE
VTVVGDELNGDHESLEVDLAQIQQRALEMSSSNVGMVITGVNTMANYEQVLHLIRYRNWH
TEALFDRKFKLVCSELNGRYISNEFKVEVNVIHTANPMDHANNAMVQPQFINQVQHASVD
LSGHNLANTHQASVVPSAATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQENGKENEM
DWDDSALTITVNPMETYEDQHSSEEEGDEEEEESEDGEEEDDITSAESDSSEDEGGEQED
QQGSSRQQQLEWDDSTY
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtccgcggggtgaagcctttcgcttctgcagtcggtctgctcttaggactatta
tgcgcggtggaggcagccaaagtaaataagcacaagccatggattgagaccacgtatcat
ggtatcgtaacagaaaatgatgacaaagttctcctggaccctccactgatagccttggat
aaagatgccccgttgcgttatgcagagagttttgaggtgaccctcaccaaagaaggggag
atctgcggcttcaggattcatgggcagaacgtgccgttcgaggcagtggtgttggataag
tccactggcgagggcgtgatccggaccaaggataaactggattgtgagctgcaaaaggag
cataccttcaccatccaggcctacgactgtggagagggacctgatggcagcaacatgaag
aaatctcacaaggctaccgtccacatccaagtgaatgacgtgaacgagtattcaccggtg
ttcaaagagaagtcctacaaagccacagtgatcgagggcaaaaagtatgacagcatcctg
aaggtggaggctgtggacgcggactgttctttccagttcagtcagatctgcagctatgag
attgtcacccccgatgtgcccttttccgttgacaaggatggcaacatcaagaacacagag
aagctgaactacagcaaggaacacatgtacaaactcaccgtgactgcatatgactgcggt
aaaaaccgtgcatctgaggacgttcttgtgaaaatcagcatcaagcccacctgcaaacca
agttggcaaggatttaataaaaggattgaatatgagcctggtacaggcagtctagccctg
ttccccagcatgcacctggagacctgcgaggagccaatcacctccattcaggccagcatc
atgctggagactaatcacatcggcaagggctgtgaccgcgacacatactccgaaaaatcc
ctgcacaagctgtgcggtgccagcgctggtactgtggagctgttgcctgctcccagcaat
tctgtcaactggactgtcggcttgcctactgacaacgggcatgacagcgaccaggtattt
gagttcaatggcacccaggccatcaaggtccctgagggtgtggtgagcaccaccctgaaa
gagcccttcaccatctcagtgtggatgagacacggacctggaagcagggagaaggagacc
atactctgcaactctgacaagacggagatgaacaggcaccactactctctgtatgtacac
aactgtcgtcttgtgctgctgctgcgtcaggagcctaccgaatcggagaactacaaacca
gctgaattccactggaaactcgatcaagtgtgtgataaagaatggcatcactacgtgttg
aacattgagttcccagcagtgactctgtttgtggatggtgccaccttcgagcccttcttg
gtcacggaggattaccctctgcatgcctccaagatcgaaacccagctcaccatcggcgcc
tgctggcaagacctctcgggacatgacaatgatactgagactctctcagagcctttgaca
ggtggcagcgcccgcatgactcagtacttcaggggcaacctagctggactcatgatccgc
tccggcaaactggagaacaagaaagttatcgactgcctctacacctgcaaggaaggtctt
gatgtgcagcttccagaggaagtagcctcttctgtgaaggtggagtttaaccccaaccag
tcttctctgagcctggagggagatgacattgagagctttgagaaagtcatgcagcacatc
tcctacctgaactcccggcagttccccaccccaggaatccgccatctgcgtatctccacc
actgtcaaatgcttcaatgaggagacgtgcatctccgtctctgactctgaaggctacgtg
atggttctccagccagaggagccaaagatcagcctcagtggaattgaccattttgcccgt
ggagcagctgaatttgagagcacggagggcgttacgctcttccctgagctgcgcatcgtc
agcaccatcacccgtgaggtggaggtggaagctgaggccgaagccgaagccgaggatgat
cccacagtgcaagagacggtggtatctgaggagatcatgcataacttggacacgtgtgag
gtgactgtggtgggagatgaactgaatggagatcatgagagtttggaggtggatctggcc
caaatccagcagagagctctggagatgagctcttctaacgtgggcatggtcatcacaggg
gttaacaccatggcgaactatgaacaggtcctgcatctgatccgttacaggaactggcac
acagaggcattgtttgacaggaagtttaaactcgtctgctctgaactcaatggccggtat
atcagcaatgaattcaaagtcgaggtcaatgtgatccatacagccaaccccatggaccat
gctaacaacgctatggtacagcctcagttcatcaaccaagtacagcacgcttcagtcgac
ctgtctggacacaacctggccaacacacatcaggcctcggttgtccccagtgctgccacc
gtcgttatcgttgtgtgtgtgagcttcctggtgtttatgatcatcctgggcgttttccgt
atccgtgctgcccaccagcgcaccatgagggaccaggaaaacggcaaagagaatgagatg
gactgggatgactctgccctcaccattactgtcaacccaatggagacttatgaggatcag
cacagcagtgaagaggaaggagacgaggaagaggaagagagcgaggacggagaggaggaa
gacgacatcaccagtgcggagtcagacagcagtgaggatgagggcggcgaacaggaagac
cagcagggttcgagcagacagcagcagctggagtgggacgactccacctactga
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