Cyprinus carpio (common carp): 109061076
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Entry
109061076 CDS
T05134
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109061076 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109061076 (lrrc4ba)
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
NGL family
109061076 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
LRRNT
Ig_2
LRR_EndoS
Agd3_C
Motif
Other DBs
NCBI-GeneID:
109061076
NCBI-ProteinID:
XP_042576253
Ensembl:
ENSCCRG00000012296
UniProt:
A0A9Q9W3P7
LinkDB
All DBs
Position
B3:23665953..23710630
Genome browser
AA seq
734 aa
AA seq
DB search
MRITTVTSLPSPSPLLLLLVQLLLWLILPGQEAVGAASTCPALCSCSNQASRVICTKRNL
EEVPDSISNNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLINLRYLNLGMCGLKDIPNLTSLVRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVSVNYTYFTTVTVETVESTGDEESALRVFNETFIHIPGPT
PSGHLWHKVDPTTASSLSILGSSSSPRATKPTFTVPISEPNYPSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGTARAIEIINVEEEIGAGTGIRGSGISGGSTVP
QGGSGGGGQSLRMHIPEIINLQDLARAEHLNHYYKPHHFNNNMMGLGLGGGSGGGLNNNN
NPSPCSQAQTTPISCTHVPVSASSTSCSMPSPVLLPTLSSHWSLKGLMSIGQNPQIEPLL
FKSSSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgaccagccttcctagtccctcccccctcctcctcttattggtc
cagctgctgttgtggctcatcctcccaggccaagaggcagtcggagccgcctccacctgt
cctgcgctctgcagttgttctaatcaagctagtcgagtgatctgtacaaaacgaaactta
gaagaggtgcccgacagtatatcaaacaacacacgatacctcaacttacaagagaactca
atacaggtgataaaatcagacacattcaaacatttgcggcacctggagatcctccagctc
tccaagaaccagattcgtcagatagaggtgggtgctttcaatggcctcccaaacctcaac
actctggaactgttcgacaaccgcctcacgctggtgccatcgcaagcttttgagtacctc
agcaagctgcgggaactgtggttacgaaataaccccattgagactttaccaggctatgcc
tttcaccgcgtcccctcactccggcgtcttgacctaggcgaactcaagaagctggattat
atatctgatgcagccttcgttggactcatcaacctgcgctacctgaacttgggtatgtgt
ggcctgaaggacatccctaacttgacttccctggtgcgactggaggagctagagttgtct
gggaaccgtctggaaatcatcagacctggatccttccaaggcctggaatctttgcgcaaa
ctatggctcatgcactctcagatgtcggtcatcgagcgcaatgctttcgatgatctcaag
agcctagaggagcttaacctatcccacaattccctgcactcattgccccatgaccttttc
acacctctgcagaagctggagcgagtgcacctaaatcacaacccatgggtgtgcaactgc
gatgtgctttggttaagctggtggctgaaagaaacggtgccgagcaacacaacatgctgt
gcgcggtgccacgcaccaccctaccttaagggaaagtacataggagagttagaccagagc
catttcacctgctatgcccccgtcattgtggagccgcccactgacctcaatgtgaccgag
ggcatggctgctgagctcaagtgtcgcactggtacctccatgacctccgtgaactggatc
actccgaacggcaccctaatgacccatggctcctatagggtcagaatttccgttctgcat
gatggcacactgaatttcaccaacgtaactctgcgtgacaccggccagtacacctgcatg
gtgaccaactcagctgggaacacaacagcaaccgctgtcctgaatgtgaccgcagcagac
gtcagtgtgaactatacctacttcacaactgtcactgtagaaactgtggagtctacagga
gatgaagaatctgcattgcgtgtcttcaacgagaccttcatccatattcccgggcctaca
ccttccgggcacctctggcataaagttgaccccactactgcctcttctctctcaatcctt
ggctcatcatcttctccccgagctaccaaacccactttcactgtccccatatctgagccc
aactatccctctggactggatgacgtgatgaagaccaccaagatcatcatcggttgcttc
gtggccattaccttcatggctgccgtcatgctggtggtgttttacaagctgaggaagcag
catcagttgcacaaacaccatgggacggcacgagccatcgagattattaatgttgaagaa
gagattggagcgggaacgggcatccgtggcagcggcatctcaggaggatccacggtaccg
caaggagggtcaggcggaggcggacagagcttgcgtatgcacatccccgaaatcatcaac
ctccaagaccttgcacgagcagagcatctcaaccattactacaagccccatcacttcaac
aataacatgatgggtctgggccttggtggaggctcgggtggaggcctaaacaataacaac
aacccttcaccctgctcccaggcccaaactacccccatctcttgcacacatgtgccagtc
tctgcaagtagtacatcatgctccatgccttctccagtgcttctgccgacccttagcagc
cactggtcactgaaaggcctgatgagtatagggcagaacccacaaattgagccgttgctt
ttcaagagcagctccaaggagaatgtccaagaaacccagatctga
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