Cyprinus carpio (common carp): 109061217
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Entry
109061217 CDS
T05134
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109061217
03036 Chromosome and associated proteins [BR:
ccar03036
]
109061217
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109061217
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109061217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
109061217
NCBI-ProteinID:
XP_042575933
UniProt:
A0A9Q9ZW04
LinkDB
All DBs
Position
B3:17024173..17093417
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AA seq
1660 aa
AA seq
DB search
MEEKKKKKQEEKKKKEAAQKKAAEQKTKVPDSAKPSPTPPPPINPSIATNPSVPLASSST
GGNGKRAPSGNQQQQPAAPRYPPREVPPRFRQHEHKQLLKRGQPLPAGSTALVQPVSTNL
TSQPFSCQTHPELPPQSGLAAQYENISPNCSATTASTNSCSGWDPLIIDERDTEAWPSIS
CKESHAPAGCPLDTESISDISSMSMATGAGQQGHFSANHPSKANASHSGGLLSSQGGASR
GWGSGPSPASGGEGKNEVSSTSVGARGWGSSNFNLNLNPNANPSAWPVLGHKGAGMGGGS
SGESNLPPPNLCSPPGTLPSQGPSSSGSIGGANGNSAGNGGSGNGSTTWGSIVPSDSSEP
HSTPSTNVSFSSEPQNLNTDGPNHTKQEPRSPGHSLPNWGVGPAGMGSFVQNPGGASQVN
GDEEPVWGNGDAKSGGGSKDSGWDSGSSWGQGGASGTSGWGQAASTGDWGKHSNSEAKGW
DSSGSPTQEQPLNSWVRGANAPASEGSSDSTECHPHRRVRSSSDEAPPVLPAQDMDPRVL
CNTGWGQTPVRQHTAWETEEAARSNCKNDIGTEAWGSSSNAANVGPTPTSGSGNPNSGTT
SRPDSGGKNEGPCPSTGAAPGWGTAMPSPQASSSWGDPTSNKKPSSGPGSWGNPTGRTAG
NLQKSGQTWGSEEKSPTWEDSQAKAKPQGWTDVPKTSHGWCNGPGGESGPGGEWGEPGDG
KKNGPSSSTWEGEGTGWNESSRGWGKPTPGVGGNWGDAQHSSVPSQGWNNKPQEGTNGNS
GSGSMGSWGGPNSVKQSGSGWGGGNGGGAKPDHIGEPTGWEEPSPHSIRRKMEIDDGTSA
WGDPSSYNKTVNLWDRNNPGTQGKPGPGNANNVPNNHHHHPHHNQPPMQTHSHGGPNSNN
NHISPDNAGPHQTGPPHNRTTLMNPGWGEMTNVHSKPEPSWGESAAPAASVDNGTSAWGK
PQGGWGDNGPEIYGRGNGPPGSAPCKPAPKSMQDGWGGGEDMGLSAGQWEQDEGDMWNST
ASQESNSSCSSWGNPPKKGPPKGKVPNKPDDTWIMNRLIKQLTDMGFPRDPAEEALKSNN
MNLDQAMSALLEKKTELDKRGMGISDYNNGLINKPMGCRPSVISKESSSDRPPFLDKDAG
LADDAQTSPFMPSPSLKLPLGSAALPGQSLGVAMQNLNNRQMQSGVFGSSGAAQARALQQ
QPLPQPSVPPLNSSQPSLRAQVPQFFSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTL
LNQLYQLQLAYQRLQIQQQMLQAQRSVSGPIRQQEQQVARTINNMQQQIQQHQRQLAQAL
LMKQQQQQQQQPPSSHLGLHPSAGKSSLDSFPAHPQASSLSVSDLQTKEPQSSPNSFSPY
PVSGLNPNMNVNCMEVGGLSMKDSPQPQSRLSQWTHPHSMENLSGNSSPMEANFSKHGAI
SAGPSLGPPSKPSLDGSYSPYNLIPSSESPASPLAPHDSWGQGKNTNDKISNGTNVNWPP
EFCPGVPWKGLQNIDPETDPNVTPGSVPSGPTINTNIQDVNRYLLRDRSGGSTPTSSQGE
ALPPSSDWPVTSSFSLSSPEADSTGKLSDMKSTWSSGPISHTQASLSHELWKVPQGPRNT
TAPTRPPPGLTNTKPSSTWGGNTLGLVAGWSSSYSAGLCV
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaagaggaaaagaaaaagaaggaagctgctcagaaa
aaggctgctgaacagaaaaccaaagtgccagactctgccaagcccagccccacccctcct
ccccccatcaaccccagcatcgccaccaacccgtctgtgcccttagccagcagcagcact
ggtggcaatggaaagcgcgcaccctccggcaaccaacagcagcagccggcagcccctcgc
tacccgcctcgagaggtgccccctcgtttccgtcaacacgaacacaagcagctactgaag
cggggccaacctctgcccgccggaagtacagctctcgtgcagccagtgtccaccaacctt
acgtctcagcccttctcctgccagacccacccagagctgcccccacagagtggcctggca
gcccagtatgagaatatatcccccaattgcagtgccactacagcctctaccaacagctgc
agcggctgggatccactgattattgacgagcgcgatacggaggcgtggccttccatttca
tgcaaagaaagccacgcccctgcaggatgccccttggacactgaaagtatcagtgacatc
agcagcatgagcatggccacaggagctggccagcaaggccatttctccgccaatcacccc
agcaaagccaatgccagccactcaggaggtctactctctagtcagggtggggccagcaga
ggctggggctctggcccgtctcctgccagtggaggagaagggaagaatgaagtctccagc
acatcagtgggagccaggggttggggctcttctaactttaacttgaacttgaacccaaac
gccaacccttctgcctggccagttctgggacataaaggggccggcatgggtggtggcagc
tctggagaaagcaaccttcctcctcctaatctctgtagcccaccgggcactctgcccagt
cagggccctagcagcagtggcagtataggtggtgccaatggaaattctgcaggtaatggt
ggcagtggcaatggcagcaccacatggggtagcattgtgcccagtgactcctcagagcca
cactccaccccatccacgaatgtgtctttcagctctgaacctcagaaccttaacactgat
ggaccaaatcacactaagcaagagcccagaagtcctggccacagcctgcctaactggggg
gttggacctgcaggcatgggctcgtttgttcaaaatccaggaggagcctcacaggtcaac
ggggatgaagaacctgtttggggtaatggagatgccaagtctggtggtggctcaaaagac
tctggttgggactcagggagcagctggggacaaggaggggcctcgggcacttctggatgg
ggacaagctgcctcaactggagactggggtaagcattccaacagtgaagccaaaggatgg
gattcctcaggctctcccacccaagagcagccgctaaactcttgggtccgtggggccaat
gccccagccagcgagggaagcagtgacagcacagaatgtcatcctcaccggagggtccgc
tcatcatcagatgaggctccccctgttctgcctgcccaggatatggaccctcgggttctg
tgtaacacaggctggggacaaacaccagtgcgtcagcacaccgcttgggagaccgaagaa
gctgcacgctccaactgtaagaatgacatcggaactgaagcctggggctcgtcctcaaat
gcagccaatgtaggaccaacaccaacttctggcagtggcaacccaaactctggcactaca
tccagacctgattctggggggaagaatgagggcccctgccccagtactggagctgcacct
ggatggggcacagccatgccatcaccccaagctagctctagttggggagatcctaccagc
aacaagaaaccttccagtggtcctggaagctggggcaacccaactggaagaacagctggc
aacctgcagaaaagtggtcagacttggggttcagaggaaaagtctcctacatgggaagac
agtcaagctaaagccaaaccacagggctggactgatgtgcccaaaacttctcacggatgg
tgcaatggacctggtggagaaagcgggcctggaggagaatggggtgaacctggagatgga
aagaaaaatggtccctccagctctacctgggagggagagggtaccggctggaacgagagc
tccagaggatggggaaagcctactccaggagtaggaggaaactggggagatgcacaacac
tccagtgtgccatcacaaggatggaataacaagccccaggagggcaccaatggcaatagt
ggcagtggaagcatgggttcttggggaggtcctaactctgtaaagcagagtggctctgga
tggggaggaggaaatggtggaggtgctaaacctgaccacattggagagcccactggatgg
gaggagccctctccacactccatccgacgtaagatggagatcgatgacggtacctcagct
tggggtgatccaagcagttacaacaagacagtcaatctctgggacaggaataaccctggg
acacaaggcaaaccaggacctggcaatgccaacaatgtacccaacaaccatcatcatcat
ccccaccataaccagcctcccatgcagacccacagccatggagggccaaattcaaacaat
aatcacatttcccctgataacgctggcccacatcaaacaggaccacctcacaatagaaca
acccttatgaatccaggatggggcgagatgacaaatgtccattcaaaacctgagccctca
tggggagagtcagccgcccctgcagcaagtgtggacaatggcacttcagcatggggtaaa
ccccaaggtggctggggtgataatggccctgagatctatggtcgaggcaatggaccccct
ggatctgccccctgcaaacctgcccctaaatctatgcaagatggctggggtggtggagag
gacatgggcctgtctgcagggcagtgggagcaggatgagggtgacatgtggaacagcact
gcatctcaagagagcaactcctcctgcagctcctggggcaacccacccaaaaagggccca
ccaaagggaaaagtcccaaacaaaccggatgatacttggataatgaatcgtctcatcaag
cagctgactgacatgggcttccctagagaccctgcagaagaggctctcaagagcaacaac
atgaacttggatcaggccatgagtgccctgttggagaagaagaccgaactagataaacgg
gggatgggaatctctgactataacaatggcctaatcaataaaccaatgggctgcaggcct
tcagtcatctccaaagaatcctcctcagatcgtccccccttcttggacaaggatgctggg
ctagcagatgatgcccaaacctcaccgtttatgccttctccgagcctgaagctcccattg
ggtagtgctgcactccctggccagagccttggagttgcgatgcaaaacttgaacaacaga
cagatgcagagtggagtgtttggtagtagcggagcagcacaagcccgggccctgcagcag
cagccccttccccagccgtcagtgccacctctcaactcatcccagcctagtctacgcgct
caagtgcctcagtttttcagccctcaggttcaagcacagcttttacagtttgcagcaaaa
aacattggtctcaaccctgcacttttaacctcaccaattaaccctcagcatatgaccctg
ttgaaccaactttatcagctgcaactggcgtaccagcgtttacaaattcagcagcagatg
ttgcaggcacagcgcagtgtttctggccccatccgacagcaagagcagcaagttgcacgt
acaatcaataacatgcagcaacagatccagcagcaccagaggcagctggctcaggctctg
ctgatgaaacaacaacagcagcagcagcagcagccaccctcctcacacctgggtctgcat
cccagcgcaggcaaatcatctctggactcatttccagcccatccccaagcctccagcctc
tctgtttccgaccttcagaccaaagagccgcagtcttctccaaactccttctcaccatac
cctgtttctggattaaaccctaacatgaatgtaaactgcatggaggtgggtggcctgtcc
atgaaggactctcctcagcctcagtcacgcctgtcacagtggacacacccacactccatg
gagaacctctctggcaactcctctccaatggaggccaacttcagcaagcatggtgccatc
tctgcaggccctagtctgggtcccccaagtaagccctctctggatggttcctacagtccc
tacaatctgattcccagctccgagtctcctgccagccccctggcacctcatgatagctgg
ggtcaggggaagaacaccaatgacaagatctccaatgggactaatgtcaactggcctcca
gagttttgtccaggagtgccctggaaaggcctgcagaatattgaccctgagactgacccc
aatgtgaccccagggagcgttcccagtgggcccaccatcaataccaacattcaggatgtg
aaccgctacctgctgagagacagaagtggaggttccaccccaacttcctcacagggtgag
gctctgcctccctccagcgactggccagtcactagctctttcagtctgtcctcccccgag
gcagacagcacaggaaagctgtctgacatgaagtccacttggtcttcggggcccatctcg
cacacccaggcttctctctctcacgagctttggaaagtcccacaaggaccccgaaacacg
acggctcccacacggccacctccaggcctgaccaacaccaagccctcgtccacatggggc
ggaaacaccctgggcctggtggctggctggagcagctcctactctgcaggtttgtgtgtg
taa
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integrated database retrieval system
