Cyprinus carpio (common carp): 109061407
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Entry
109061407 CDS
T05134
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03440
Homologous recombination
ccar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109061407
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109061407
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccar01002
]
109061407
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109061407
03036 Chromosome and associated proteins [BR:
ccar03036
]
109061407
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109061407
Peptidases and inhibitors [BR:
ccar01002
]
Metallo peptidases
Family M67
109061407
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109061407
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
109061407
BRISC complex
109061407
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
109061407
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
109061407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
DUF7385
REP_ORF2-G2P
DUF6262
Motif
Other DBs
NCBI-GeneID:
109061407
NCBI-ProteinID:
XP_042604001
Ensembl:
ENSCCRG00000028618
UniProt:
A0A8C1LJ38
LinkDB
All DBs
Position
B21:complement(17910471..17914198)
Genome browser
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTDRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRRIHSLTHLDPITKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNK
QSIIKLQKEKEQLTQELASL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagcgcggtacatttagagtcagacgcatttctagtctgtatgaatcacgct
ctgagcacggagaaagaggaagtaatggggctctgcatcggcgaggtggacacagaccgc
atcgtgcacattcattctgtcataatcctgcgtcgatcagacaagaggaaagacagagtg
gagatttcaccagagcagctgtcagcagcgtccaccgaagcggagaggttggctgagatg
acaggacgtcccatgagggttgtgggctggtaccactctcatccacacatcactgtgtgg
ccatcacatgttgatgttaggactcaagcaatgtatcagatgatggatcagggttttgtt
ggactcatcttctcatgctttatagaagataaaaacacaaagactggtagagtcctgtac
acctgtttccagtcagtacaagcccagaaaggctcagagtatgagcggattgagatcccc
atccatgtagtcccacatgaagccatcgggaaagtgtgtctggagtctgccgtggagctg
cccagaatcctctgtcaagaagaacaggatacatacagaaggattcacagtttaactcat
ctggatccaatcacaaagatacataatggatcagtgttcactaaaaacctgtgcagtcag
atgtcggccattagcggcccgctgctgcagtggctggaagatcgactggaacagaacaaa
caaagtatcatcaaactccagaaagagaaagagcaactgacacaagaactggcttcatta
taa
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integrated database retrieval system
