Cyprinus carpio (common carp): 109061516
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Entry
109061516 CDS
T05134
Symbol
pcbp2
Name
(RefSeq) poly(rC)-binding protein 2 isoform X1
KO
K13162
poly(rC)-binding protein 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04216
Ferroptosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09143 Cell growth and death
04216 Ferroptosis
109061516 (pcbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109061516 (pcbp2)
03041 Spliceosome [BR:
ccar03041
]
109061516 (pcbp2)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109061516 (pcbp2)
mRNA cycle factors
Common to processing body (P body) and stress granule
109061516 (pcbp2)
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
109061516 (pcbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
109061516
NCBI-ProteinID:
XP_042586507
Ensembl:
ENSCCRG00000051099
UniProt:
A0A9R0A5S5
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All DBs
Position
B9:complement(1247199..1263562)
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AA seq
347 aa
AA seq
DB search
MDSGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
LAGPTTAIFKAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKI
KEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRP
KPSGSPVIFAGGQVSVSVPLQLSCVCVCVRMICVSSQMCVLQAYAVQGQHAIPQPDLTKL
HQLAMQQSPFPLAPSSQGFTAGMDATAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSG
AQIKIANPVEGSTDRQVTITGSPASISLAEYLINARLSSEATGMAAN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggactctggtgtgattgaaggaggacttaacgtcacgctcaccatcagactgctcatg
catggcaaagaagtgggcagcatcatcggaaagaaaggtgaatcggtgaagaagatgcga
gaggagagcggcgctcggatcaacatttctgaagggaactgccccgaacgcatcatcact
ctcgcaggccccaccaccgctatcttcaaagccttctccatgatcattgagaaactagaa
gaggacatcagcagctccatgtccaacagcacggccacctcgaagcccccggtcacgctg
cggatcgtggtgccggccagccagtgcggctcgctcatcggcaagggcggctgcaagatc
aaagagatcagggagtcgacaggagctcaggtacaggtggctggagacatgctgcctaac
tctactgagagagccattactatcgccgggaccccactgtccatcatcgagtgtgtcaaa
cagatctgtgtggtcatgctggagtctcctcccaaaggtgtgaccatcccttaccgaccc
aaaccctcaggatcgcctgtcatttttgcaggaggacaggtgagtgtttcagtgccactg
cagctgtcttgtgtgtgtgtgtgtgtgagaatgatctgtgtttcatctcaaatgtgtgtt
ttgcaggcatatgcggtgcagggacaacatgccattcctcagcctgatctcactaaactc
caccagttggcaatgcaacagagtccgtttcctttggcccccagcagccaaggcttcact
gctggtatggacgctactgcacagacaggctctcatgaactgaccattccaaatgatttg
attggctgcatcatcggtcgccaaggtgccaagataaatgagattcgtcagatgtcaggg
gcacagatcaagatcgccaatccagtggagggctcgaccgaccgacaggtcaccatcacc
ggctcacctgccagcatcagtctggccgagtacctaatcaacgcacgactctcatccgag
gcaacaggaatggccgcgaactga
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