Cyprinus carpio (common carp): 109061812
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Entry
109061812 CDS
T05134
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109061812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109061812
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109061812
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109061812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-B_box
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
zf-C3HC4_2
ANCHR-like_BBOX
DUF4667
zf-RING_4
zf_RING_Vps8
DUF7605
Motif
Other DBs
NCBI-GeneID:
109061812
NCBI-ProteinID:
XP_042606589
UniProt:
A0A9Q9XRC4
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All DBs
Position
B23:complement(5984878..5989172)
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AA seq
541 aa
AA seq
DB search
MSQSKPEERLALELSCAICLQLYRDPVALPCGHNYCLGCIQNAASAEDPKSPKRCPECRE
EYGSPEMLPKNFKLSSIVDGFLVATTGGGLKGGPTVPCDQCLDDPVAAVKFCTRCEMSLC
PGHLKKHEERHRSLHVLVEPSAERDGKRCPVHLKVTEYLCAQERLFLCSECLMEGTHQHH
EVQTFEVAKEEMKRVLEELGKSVSDKLQITEALVKSASEGPTDKAEDKLVARANILLDNM
TSLISTYKSRMSTVMNDELHSRDKSWQANLCDLEGCLHQLQEAQKCTGEVLSQSSEFLFI
QNYINVEARVRQAANVTIPALPSQESSNAKQLRSILRTDAFHAEMSLLLEYLHGLMNPLD
LTFNPATAHPSLLLSSDLKTVKQCPGVKSSTAGDQSERFSTATQVMCTQSFSTGVHMWAV
EVGPGCMWSLGLCYKNISRKGDHSRLGHNTSSWRLQWKNKKLTACYDSANVAVAEGLVMP
PKKVEVTLDYEGGTIAFHSSGNGGRRQHLHTFSAVFKDTVYPAFAIHSTSEESWITLLTG
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaagcaaacctgaggagcgtctagctttggagttgagctgtgcaatctgtttg
cagctgtatcgtgatcctgtggcccttccatgtggacacaattattgcttgggttgtata
caaaatgctgccagcgcagaagatcccaagtccccaaaacggtgcccggaatgcagggaa
gaatacggcagcccggagatgcttcccaagaacttcaagcttagcagtatcgtggatggg
ttcctagtggccacgacaggcggcggactgaaaggaggccctactgtgccatgtgaccag
tgcctggacgaccctgtagctgcggtgaaattctgcacacgctgtgaaatgtcactgtgc
cccggccatctcaaaaaacacgaggaacggcaccgctcgctacacgttttagtggagccg
tctgcagaacgggatgggaagaggtgcccggtgcacttgaaggtcacggagtacctgtgc
gcacaggagcgcctgttcctctgctccgagtgcttgatggagggcactcaccagcaccac
gaggtgcagacattcgaggtggcgaaggaggagatgaagagagttcttgaggaactgggg
aagtctgtatctgacaagttacagattacagaagctctggtgaaaagtgccagtgaaggt
cctacagataaggccgaagataagctggtggccagagcaaacatactgctggacaacatg
acttcacttataagtacatacaagagtcgtatgagcactgtgatgaacgatgagcttcat
tctcgggacaaaagctggcaggccaatctgtgcgacttggagggttgtctacaccagctg
caagaagcccaaaagtgcaccggtgaggttctctctcaatcctcagagtttctcttcatc
cagaactacatcaacgtcgaagcaagggtccgccaggctgctaacgtcaccattcctgca
ctaccttcacaagagtcttccaatgccaagcagctgcgctcgatcctacgtacagatgcc
ttccatgccgagatgagtcttctgttggagtacctccatggcttgatgaaccctctagac
ctgaccttcaacccagccacggcccatcctagtcttctgctctccagcgatctcaaaaca
gtcaagcagtgtcccggagttaagagcagcaccgctggagatcagagcgaacgcttctcc
acggccactcaagtcatgtgcacccagagtttctccacaggggttcacatgtgggcagtg
gaggttggtcctgggtgtatgtggtctctgggactgtgctataaaaacatctcacgtaaa
ggtgaccacagcaggctggggcataataccagttcctggaggttgcagtggaaaaacaag
aagctgacggcgtgctatgactcggctaatgtggccgtagctgaagggctggtcatgccg
ccaaagaaggttgaagtgaccctggattacgaaggaggaactattgcattccacagctca
ggtaatggagggcgaaggcagcaccttcatacatttagtgctgtgttcaaggacacagta
tatcctgcgttcgcgatccactctacttcggaggagtcatggataactcttctgactgga
gtttga
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