Cyprinus carpio (common carp): 109062025
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Entry
109062025 CDS
T05134
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109062025
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
90S particles
Other 90S particles
109062025
Pre-60S particles
Other pre-60S particles
109062025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
EIF3I
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
109062025
NCBI-ProteinID:
XP_042593558
Ensembl:
ENSCCRG00000040892
UniProt:
A0A9R0ACT4
LinkDB
All DBs
Position
A4:complement(1811327..1819276)
Genome browser
AA seq
479 aa
AA seq
DB search
MSSQITCVGWVKRGVAKETPDKVELSKEELQRIISEAKQQLADAGDEEEEVEDKGVVSEE
ASAPAASEDIKEERDDEEEDDELAEYGLDKYDEEDIATSNLGDSLAGLTVFGTNEEDPYV
TIKDTDQYEREDFQIKPTDNLILAGRAEKDCCNLEVYVYNSEEDSLYVHHDILLPAYPLC
VQWLNFDPNPEEGRGNYAAVGNMTPVIDVWDLDVVDCLEPVFSLGSKKKKKAKKAAEPVD
GHTEAVLDLSWNSLVRNVLASASADETVILWDMEKGKPAATLTKHTDKVQTLKFHPFEAQ
TLLSGSYDKSATLYDCRSPDDSHRIWRFSGQVERVVWDHFSPCNFLASTEDGFVYCLDAR
SDKAVFTLRAHDGEVSGMDLSSQIRGCLVTSSADKHVKIWDVLGNKPALIHSRDMKMGVL
FCGSCCPDLPFVYAFGGQKDGLRVWDISDVAAVAEAFRSRERLVANTVSGASGSEMDVS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcaaataacgtgcgtcggatgggtgaagcgcggggtcgctaaagaaacgccg
gataaagttgagttgagcaaagaagagctgcagcgcatcatatcggaggctaaacagcag
ttagcggatgctggtgatgaggaggaggaggtggaggataaaggtgttgtcagtgaagag
gcatcagctcctgctgctagtgaagatataaaagaggagagagatgatgaggaagaggat
gatgagcttgcagagtacggactggacaaatatgatgaagaagacatagccacatcaaat
cttggagacagtctggcagggctgacggtgtttggcaccaatgaagaggatccgtacgtc
accatcaaagacaccgatcagtacgagcgggaggattttcagattaaacccaccgataac
ctgattctagccggacgggccgagaaagactgctgtaacctggaggtttacgtgtataac
tcggaggaagactctctgtatgtgcatcatgacatcctgctgcccgcgtatccgctgtgt
gtgcagtggctgaactttgaccctaatccagaggaagggcgagggaattacgcagctgta
gggaacatgacgcctgtgatagacgtctgggatctggatgtagtggattgtttggagccg
gtcttctcgctcggcagcaagaagaagaagaaagcaaagaaggcggctgaacccgtcgac
ggacacacggaggctgtgctggatctgtcctggaacagtctggtcaggaatgttctagcg
agcgcgtccgcggatgagacggtgatcctgtgggatatggagaagggaaaaccagcggcg
accctcacaaaacacaccgataaagttcagacgctgaaattccacccgtttgaggctcaa
actcttctcagtggatcttacgacaagtctgcgaccctgtacgactgccgcagtcctgat
gacagccatcggatctggcgcttcagtggacaggtggagcgcgttgtttgggaccatttc
tctccgtgcaacttcctggcgagtacagaggacggcttcgtttattgtctggacgctcgt
tctgataaagccgtgttcacactcagagctcacgatggagaagtttcagggatggatctg
agcagtcagatccgcggctgtctggtcacgtcttcagcagacaaacacgtgaagatctgg
gacgtcctgggaaacaaacccgccctgatccactccagagacatgaagatgggcgttttg
ttctgcggctcctgttgtccggatctgccgttcgtctatgcgttcggaggacagaaggac
gggctgcgcgtctgggacatcagcgacgtcgctgcagtcgcggaagctttcagaagtcgg
gaacgtttggtggcaaatacagtatccggagcgtccggcagtgagatggacgtctcataa
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