KEGG   Cyprinus carpio (common carp): 109062144
Entry
109062144         CDS       T05134                                 
Name
(RefSeq) WD repeat-containing protein 18-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccar03009]
    109062144
Ribosome biogenesis [BR:ccar03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    109062144
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st WDR55 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_WDR75_2nd WDR54 Ge1_WD40 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 109062144
NCBI-ProteinID: XP_018934777
Ensembl: ENSCCRG00000047605
UniProt: A0A9Q9V3B2
LinkDB
Position
A11:8154402..8218958
AA seq 431 aa
MAAPVEVVLSADSAGQLFNCAVFDPHSGSEFLSYRGGNTSSRSLTVLNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGTVTCLCASPDGLCVLAGIAEAIYLWEMSTGNLLAILSRH
YQDVSCIRFTDDSSHFVSGGKDNLALIWNLSSVVQLDSSRAPEPRHILSRHSLPITDLHC
GLMGPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIF
QVSLCSTSLNHDKTFQTDSDGNQVFKGHRNLVTCLSVSMDGTLLLSGSNDETVRMWDVQS
KQCIWSINHKGPVTNAAIIPAPANMFLADSHPAVPLPRFSRHLNPSEQGDGTGSGGMCLR
LGANTQELDGTYLEKADELYSLMCAVTDKSVFGDGENTKVRVSELEEEVKTLKKINKDLY
EFSTQLLTKPN
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggcggcgcccgtggaggtagttctgtctgcagattcagcgggtcagctgtttaactgc
gcggttttcgaccctcattccgggtcagagttcttgtcctatcgtgggggcaacacctct
tcccggtctttaacagtcctgaacggagaatacatattaggagctcaactcggcaagaac
ttcatcaacgtgtgggagatccaaagaaaggaccagctgcagcagaagattgtgtgtcct
gggaccgtcacgtgtctctgtgcgtctcctgatggtctctgtgtactggcaggcattgct
gaagcgatatacctgtgggagatgtcaacaggaaatttgctggctattttgagtcgtcac
tatcaggacgtgagctgcatccggttcactgatgacagcagtcattttgtgtcgggaggg
aaggacaatctggctctcatatggaatctctccagtgttgttcagttggattcgtcccgc
gcaccagaaccacgtcacattctttctcgccactccctccccatcactgacctccactgc
ggcctgatgggaccccaagcccgtgttgccaccgcatccctggaccaaactgttaaggtc
tgggaaatttcctctggggagatgctcctgtccgttctcttcgatgtcggcatcatgtca
gtgacctttgacccctgcgagtatttcctattctgcggaggtagtgacggcaatattttt
caggtgtctctctgcagtacgagtttaaaccacgataaaaccttccagactgacagcgat
ggcaatcaggtgtttaaaggacacagaaatctggtgacatgtttgtctgtgtctatggac
gggaccctcctgctgtccggctccaacgacgagactgtcaggatgtgggacgttcagagc
aagcagtgcatatggtccatcaaccacaagggtcctgttaccaatgctgctatcatccca
gcacctgccaacatgttccttgctgacagtcatccagccgttccactgccacggttcagt
cgccacctgaacccctccgagcagggtgacggcacgggctcagggggcatgtgtctgaga
ctgggagccaacacacaggagctggatgggacatatttggagaaggcagacgagctctac
tctctgatgtgtgctgtcacagacaagagtgtgtttggtgatggggagaacactaaggta
cgagtgtctgaactggaggaggaggtgaagaccctgaagaagatcaataaagatctgtat
gagttctccactcaactcctgaccaaacccaactag

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