Cyprinus carpio (common carp): 109062224
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Entry
109062224 CDS
T05134
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109062224
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109062224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109062224
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
SR proteins
109062224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
RRM_5
SET_assoc
DUF7376
RSRP
Motif
Other DBs
NCBI-GeneID:
109062224
NCBI-ProteinID:
XP_042633741
Ensembl:
ENSCCRG00000024911
ENSCCRG00000046869
UniProt:
A0A9R0BG92
LinkDB
All DBs
Position
A20:complement(15630716..15637300)
Genome browser
AA seq
273 aa
AA seq
DB search
MSGCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGGGGDGGRFPARYSRGSQDSRRNPPPMRTENRLIV
ENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASHSDLKNALEKLSGKEINGR
KIKLVEATRKKSRTRSRSNSSSRSRSRGRSTSRSRSRSHSRSPKSHNRSRSRSRSTSASP
VRPKEAPHAESASPPTPAQRPPPSRSPSADSRH
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttgtcgtattttcatcggtcgattaaacccctctgctcgggaaaaggacgtc
gagcggttcttcaagggttacggaagaatcagggacattgacctgaaaagaggcttcgga
tttgtagaatttgatgatccgagagatgcagaagatgctgtttatgagcttgatgggaaa
gagctctgcaatgagagggtgaccatcgagcacgcccgtgtccgtctgcgtggaggccga
ggccgcggtggtggtggtgggggtggtgatggaggtcgttttcctgctcggtatagccgt
ggctcccaggacagccggaggaatcctccaccaatgcgcacagagaatcgcctcattgtg
gagaatttgtcatcgagagtcagctggcaggatttgaaggatttcatgagacaagctgga
gaggttacttttgcagatgcccatcggccaaagcttaatgagggtgtggttgagtttgct
tctcatagtgatctaaaaaatgcccttgagaagctgtctgggaaggagatcaatggaagg
aaaatcaaacttgttgaggcaaccaggaaaaaatccagaactcggtctcgttcaaatagc
tcatcccgttctcgttccagagggcgctccacatcacgttctcgtagccgctcccattcc
cgaagccccaaatcacataaccgctccagaagtcggtcccgttcgaccagtgcttctcct
gtgcggcccaaagaagcaccacatgctgaatccgcatcaccaccgactccagcgcagcgt
cccccaccgtcccgttccccgtctgctgacagtcgtcattag
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