Cyprinus carpio (common carp): 109062620
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Entry
109062620 CDS
T05134
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04145
Phagosome
ccar04814
Motor proteins
ccar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109062620
09142 Cell motility
04814 Motor proteins
109062620
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109062620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109062620
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccar04812
]
109062620
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
109062620
Cytoskeleton proteins [BR:
ccar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
109062620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML
WDR55
Dynein_IC2
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
CCD97-like_C
Beta-prop_SPT8
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
109062620
NCBI-ProteinID:
XP_042632915
Ensembl:
ENSCCRG00000040559
UniProt:
A0A9Q9Z7R2
LinkDB
All DBs
Position
A19:21272065..21331595
Genome browser
AA seq
630 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEEKKKKESETQQKAEAVPEDSDLDRKRRETE
ALLQSIGISPEPPLVPTPMSPSKSMSTPSETGSQDSVDGAAAGRYRTLQWDTDPSVPQLQ
ADSELGRRTHRLGPSKITQVDFLPREVVSYCKETQTPLAAHQSEEDEEEEEEVTEPKTGP
ENDLQEEEESKDTKEGHPRELTEEEKQQVLHSEEFLIFFDRSIRVMERALAEDSNIFFDY
SGRDLEEKYRDLQGGSSLSLSRLFYDEHWSKHRVITCLDWSPQYPELLVASYNNNEDAPH
EPDGVALVWNMKFKKTTPEYIYHCQSPVVSVGFARFHPNLLVGGTYSGQIVLWDNRSHRR
TPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYN
KSKPVAVTGMAFPTGDVNNYIVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSA
VGPVDFSHLFVTSSFDWTVKLWSTKQNKPLYSFEDNADYVYDVMWSPVHPSLFAAVDGMG
RLDLWNLNNDTEVPTASVTIEGAPALNRVRWAAGGKEVAVGDSEGRVWIYDVGELAVPHS
EDWAHFGRTLMEIRANHGDGEEEGPVELAT
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagtgacctaaaagctgaacttgagcgcaagaaacagcgccttgctcaa
atcagagaggaaaaaaagagaaaggaggaagaaaaaaagaagaaagagtcagagacacaa
cagaaagcggaagctgttcctgaggactcagatttggaccgcaagcgcagggagactgag
gccctcctccagagcattggaatctcacccgaacctccattagtcccgactcccatgtcc
ccatcaaagtcaatgagcacacccagcgagacaggcagccaggactcggttgatggagca
gctgctggaagatataggaccttgcagtgggacactgacccctctgttccccagctccag
gctgactctgagctcggacgtcgaacacatagattgggaccttctaagataactcaggtg
gatttcctgcccagagaggtggtgtcctactgtaaagagactcagacaccgctagcagct
catcaatctgaagaagatgaagaggaggaagaagaggtcacagaaccgaaaactggccca
gaaaatgacctgcaggaggaggaagaaagcaaggacacaaaggaaggccacccgcgggag
ctgacggaggaagagaaacagcaggttttgcactcggaggagttcctcatcttcttcgac
cgcagtattcgtgtgatggaaagagcattagctgaggactccaacatcttctttgactac
agcggacgagacctggaggaaaaatacagagatctgcagggtggctccagtctctctctc
agtcgtctgttctatgatgagcactggtcaaagcatagggtcatcacctgtctggactgg
tcccctcagtaccctgagctcttggtggcctcctacaacaacaatgaagacgctcctcat
gagccagacggtgtggctttggtgtggaatatgaagtttaagaagaccacaccagagtac
atctaccactgccagtctccagtggtgtcggtgggttttgctcggtttcatcctaacctg
ttggtgggtggcacatactcggggcagattgttctctgggacaaccgaagtcaccgaaga
acaccggttcagaggacccccctgtccgctgcagcacacactcaccctgtctactgcgtc
aatgtggtcggcactcagaacgccaacaacctgatcacggtgtccacagatggccggatg
tgctcctggagcctggatatgctgtcacagcctcaggagagcatggagcttgtttataac
aagtctaagccagtggctgtgactgggatggccttccccactggagacgtcaataattac
attgttggcagtgaggagggaacagtgtatacagcatccagacatggcagtaaagctggc
atctgtgagatgtttgagggccatcagggcccagtgacaggcatcagttgtcacagtgcc
gtgggtcctgtcgatttctcccacctctttgtcacctcttcttttgactggactgtaaaa
ttgtggagtacaaagcaaaacaagccgctgtactcctttgaggataatgcagactacgtc
tacgatgtgatgtggtctcccgtgcacccctcgctcttcgccgccgtggacggcatgggt
cgtctggatctgtggaacttgaacaatgacactgaggtgcccaccgctagtgtcacaata
gagggagcccccgctctgaaccgcgtccgatgggccgcagggggcaaagaggtcgctgtg
ggagactcagagggacgtgtgtggatatatgatgttggagagctggccgtgccccacagt
gaggactgggcccactttggccgcacgctgatggagatccgtgccaaccacggggacggt
gaggaggaggggcctgtggagctggccacgtaa
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integrated database retrieval system
