Cyprinus carpio (common carp): 109062693
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Entry
109062693 CDS
T05134
Symbol
vldlr
Name
(RefSeq) LOW QUALITY PROTEIN: very low-density lipoprotein receptor
KO
K20053
very low-density lipoprotein receptor
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109062693 (vldlr)
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109062693 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
109062693
NCBI-ProteinID:
XP_042588116
Ensembl:
ENSCCRG00000002363
UniProt:
A0A9Q9WS95
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Position
B10:5263386..5283086
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AA seq
876 aa
AA seq
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MVTSTLGLLILPVCLQLCGFSRGSRTECEQSQFQCGNGRCIPSVWQCDGDLDCSDGSDET
SCVRKTCAEVDYVCRSGQCIPKRWQCDGEPDCEDGSDETMEMCHTRTCRVNEFSCGVGST
QCIPVFWKCDGEKDCDNGEDEINCGNITCAPLEFTCASGRCVSRNFVCNGEDDCGDGSDE
QDCAPSSCGPSEVPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGSVAARKAKCSAKVLQ
CGSGECIHRKWRCDGDPDCKDGSDEKNCSARTCRPDQFKCEDGSCIHGSRQCNGFRDCAD
GTDEVNCKNLTQCKGPDQFKCRSGECIEMSKVCNKVRDCPDWSDEPIKECNTNECLINNG
GCSHICLDLTIGYKCDCTLGLQLIDRKTCGDVNECLNPGICSQICINLKGGYKCECHNGY
QMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVAVDADFVQQTIFW
ADLGQKAIFSTVLDKQEASHMKVIDNIQMPVGIAVDWIYKNIYWSDLGSKSIAVANFNGT
KRKVLFNSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGIDRQVLVETDIQWPNGI
TLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENE
AIYGANKYTGSEVTLLASNLNEPQDIIVYHELIQLSGTNWCNEKLENGGCSFMCLPAPQV
NKHSPKFTCVCPQGQTLTSDGLRCRPEAPTAAPRDVGRVTPHPSHPKASAMPKVASEPVW
AEGNISTSIHEVNSSAKGSAAAWAILPVLLLAMAAAGGYLMWRNWQIKNKKSMNFDNPVY
LKTTEEDLNINISRHSASVGHTYPAISVVNTEDDLS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctactctggggctcctcattctgccagtatgtcttcagctgtgtggattt
tcgcgcggttcccgaacagaatgtgagcagtctcagttccagtgtgggaacggccggtgc
atcccgtctgtgtggcagtgcgacggcgacctggactgctcggacgggagcgacgagacc
tcctgcgtgaggaagacctgtgccgaggtggactacgtctgccgcagtggccagtgcatt
cccaagagatggcagtgcgatggggaaccagactgtgaggatggctcagacgagaccatg
gaaatgtgccatacgaggacctgccgagtgaacgagttcagctgtggcgtcggctccacg
cagtgcattccggtcttctggaagtgtgacggtgagaaagactgcgacaacggagaggac
gagattaattgtggtaacattacatgtgctcctctggagttcacctgtgccagtggccgc
tgtgtttctcgtaattttgtctgtaatggtgaggacgactgtggggatggcagcgacgaa
caggactgtgctccttcctcctgcggcccgagtgaagtcccgtgtggaaataatacctgc
attcctaggagctggctgtgcgatgacgatgtggactgccaagaccaatcggacgagtcg
ccagagcgttgcgggagcgttgcggcacggaaagctaagtgttcagctaaagtgttgcag
tgcggctctggggaatgcatacataggaagtggcgctgtgacggggatccagactgcaag
gacggcagcgatgagaaaaactgctctgcccgtacctgcagacctgaccagttcaagtgt
gaagacggcagctgtatccatggcagccgacagtgcaacggatttcgagattgtgcagac
ggcacggatgaagtcaactgcaaaaacttaactcagtgtaaaggtcctgaccagttcaag
tgtcggagtggagagtgtattgagatgagtaaagtgtgtaataaggtccgtgactgtcct
gactggagtgatgaacccatcaaagagtgcaatacgaacgaatgcctaatcaataatggg
ggctgctcgcacatctgccttgacctgacgattggctacaagtgtgactgcacgctagga
ctccagctcatcgatcgcaagacctgcggtgatgtcaatgagtgcctcaatcctggaata
tgcagtcaaatatgtataaatcttaaaggagggtacaaatgtgaatgtcacaatggctac
cagatggaccccacgaccggagtgtgcaaagctgtaggtaaagagccctgtcttattttt
accaatcgaagagacatccgtaaactaggactggagcggcgtgaatatactcagattgtg
gagcagctgcggaacacagtagctgtagatgctgacttcgttcagcagacaatattctgg
gctgacctggggcagaaggcgatttttagcacagtattggataagcaggaggcaagtcat
atgaaagtgattgacaacattcagatgcctgttgggattgcagtggactggatttacaaa
aacatctactggtcagacctgggcagtaagagtatagcagtggccaacttcaatgggacc
aagaggaaggtactctttaacagcggcctgaaggaaccggcctctattgctgtagatcct
ctatcagggttcctgtattggtcagactggggcgaaccagctaagattgagaagtctggt
atgaatgggattgacagacaggtcctggtagagacagacattcagtggcccaatggaata
actcttgatctgatcaagggccgactttactgggtggattcaaagctgcacatgctttgt
agtgtagacttgaatggagacaaccgccggaaggtgctgcagtcaccagactacctggcc
cacccttttgcccttactgtttttgaggatcgagtgttctggacagacggtgagaatgag
gcaatctacggtgcaaacaagtacacaggatctgaagtaactctgctggccagcaacctc
aatgaaccccaggacatcattgtgtaccacgaactaattcaactgtctgggaccaactgg
tgtaatgagaagttggagaatggaggctgttccttcatgtgcctgccagctccacaagtt
aacaaacattcccctaaattcacctgcgtgtgtcctcaaggtcaaacactcacctcggat
ggcctgcgctgcagaccagaggcacccactgccgccccccgagatgtagggagggtgacc
cctcaccccagtcaccctaaagcatctgcaatgccgaaggttgcctctgaaccagtttgg
gctgaaggaaacataagcacctctatacatgaagtgaattcatcagccaaaggatctgct
gctgcctgggctattctacctgtgttgttattggccatggctgctgcgggtggttactta
atgtggcgcaactggcagatcaaaaataagaagagcatgaactttgataatccagtatat
ctgaagaccacagaggaagacctcaatatcaatatcagcagacacagcgcttctgtaggc
cacacgtaccctgctatttcagtggtaaacacagaagacgacttgtcataa
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