KEGG   Cyprinus carpio (common carp): 109062701
Entry
109062701         CDS       T05134                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    109062701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109062701
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     109062701
SSDB
Motif
Pfam: DUF3337 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_SPT8 NBCH_WD40 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_Vps41 WD_LRWD1 Beta-prop_IP5PC_F Beta-prop_NWD2_C WD40_RFWD3 WDR54 Beta-prop_HPS5 WD40_like Beta-prop_NUP159_NUP214 Nucleoporin_N Tfb2_C RAWUL Beta-prop_BBS7
Other DBs
NCBI-GeneID: 109062701
NCBI-ProteinID: XP_018935316
Ensembl: ENSCCRG00000051259
UniProt: A0A9Q9V3G6
LinkDB
Position
A2:24617190..24624705
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIREEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKEKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQTG
TVIISGSTEKVLRVWDPRTCAKLMKLKGHADNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCTDLRNPDLRLLICEEKAPILKM
ELDKSADPPQAIWVSTTKSFVNKWSLKGMQNFRASGDYDNDCSAPLTPLCTQPEQVIKGG
TSIVQCHILNDKRHILTKDSNNSVAFWDVLKACKGEDLGKVDFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVAAKDASFTSPDGSDPKLNLGGLLLQALLEFWPRTHIN
PVEEEEIELNHVNGEQESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDTESQTTSSSANDKPGEQEKEEDVAIVAEEKIELMCLDQLLDPNMDLRTVKHF
IWKSGGDLTLHYRQKAT
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcagaacgctgctggaaggagaaaagtgcaggtttcctacgtg
attagagaagaggtggagaagtacaatcgtaatggtgtgaacgctcttcagttggatcct
gctctcaacagactcttcacagccggccgagattccatcatcaggatatggagtgtcaat
caacacaaacaggatccttacatcgcttcaatggagcatcacacggactgggtgaatgac
atcatcctctgttgtaatggaaaaacattgatatcagcctcgtcggacaccaccgtgaaa
gtctggaatgcacacaaagggttctgcatgtccactttacggacacataaggactacgtc
aaagctttagcatatgcgaaggaaaaggagctggtggcttcagccggtctggaccggcag
atcttcctgtgggatgtgaacacactgacggctctgactgcctctaataatacagtcacc
acttcctcactaagtggaaacaaggactccatctacagtctggccatgaatcagacagga
accgtgatcatctcaggatctacagagaaggtcttgagggtctgggatccacggacatgt
gctaagctaatgaagctgaaaggccacgctgacaacgtcaaatcattattgttaaacaga
gacggcacacagtgtctctctggtagctccgatggtacgatacgcttgtggtctctcggt
cagcagcgatgcatcgccacataccgggtccacgatgagggcgtgtgggccctgcaggtg
aacgaggccttcacgcacatctactctggcggacgtgaccgaaaaatctactgtacggat
ctgcgtaaccctgacttgcgtctactcatatgtgaagagaaagctcccatcctgaagatg
gaattggacaaatcagctgatcctcctcaagcaatttgggtgtccacaacaaaatcattt
gtaaacaaatggtctctaaagggcatgcagaacttcagagcatccggagactatgacaat
gactgtagtgccccgttaactccactgtgtacacagccagagcaggtcatcaaaggtggc
accagcatcgttcagtgtcacattctcaatgataagaggcacatacttaccaaagactcc
aataacagtgtggcattctgggatgtcctgaaggcatgtaagggggaagacctgggtaaa
gtggactttgatgaagaaattaaaaagaggttcaagatggtctatgtgcccaactggttt
tctgtagatctcaagacagggatgctgactatcactctggatgaaagtgattgttttgcg
gcgtgggtggcagctaaagatgctagttttacaagccctgacggctctgatccaaagttg
aatctgggtgggctgctcctgcaggcactgttagagttctggcccagaactcatataaac
ccagtggaagaggaagaaatcgaactcaaccatgtgaacggtgaacaggagagccgaatt
cagaagggcaacggctacttccaggttcctccacacactcctgtcatctttggtgaagca
ggaggaagaacgttgtttaggttattgtgccgtgattctggaggagagacagagtccatg
ttactgaatgaaactgtacctcagtgggttattgatatcactgtagataaaaacatgcca
aaattcaacaagatcccgttctacctccaacctcattcgtcatctggggccaaaacactc
aaaaaggaccgtttgtccgctagtgacatgctgcaggtgcggaaagtgatggaacacgtc
tacgagaagatcatcaacctcgacacggagtcacagaccaccagctcctcagccaatgac
aaaccaggagagcaggagaaagaggaagacgtggcaatagtggccgaagagaagattgag
ctcatgtgtttagatcagcttttggatccaaacatggacctcaggactgtaaagcatttc
atctggaagagcggtggagacctgacccttcattatagacagaaagccacgtga

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