Cyprinus carpio (common carp): 109063050
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Entry
109063050 CDS
T05134
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109063050
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109063050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
Helicase_C
CUE
HBS1_N
HTH_8
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
109063050
NCBI-ProteinID:
XP_042585816
UniProt:
A0A9R0A6P5
LinkDB
All DBs
Position
B8:14617296..14626581
Genome browser
AA seq
969 aa
AA seq
DB search
MSFFNLDRFRFQRDSAADSHCKSSDGSNSDKENKRAHQRKTDGRCASGKAYEDVSADDKV
VRMSKDTTSVSKNQISKDMEDKIIKLMEIFPQKSKKDLLEVVESTSTLEGAIAHCLMIYG
DDDSSRQKGKAGHSEDEDNDQPKKRRKILHSESEEEEEEDSDEEESQETGRERQEALLKK
LKKKLPDIEKEVLRDVLREHDWNYENALGSLLVFSSTDSSSPEDQSKQKSKSSHSREKKD
KSSQKPDCSSSLSRWLTAAPSPVPKVSSVPSPKTQKSAVGKSMFKNTSFKRKRGDESPLN
DVSTSEDEEEIDSDVESISDDLDSEDEDSISGNLQDKIIQFLQEASLDELALISGCSIKK
ARKIISLRPFNTWKDVKEQFFKDNGLSIDLVHGCKVVLKERQVVRDLMGRCEKIAKKMTK
DVTHVIEAGMGSIKQPKILNSNFKLQPYQLIGLKWLILLHQHNLSGILADEMGLGKTIQA
ISFLAHLYEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRRYLRQDILS
GLVEFNIIVSTYNLTIGNDHDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMAINAEHR
LLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESRFHKERIAQAKLI
MKPFILRRVKSEVLKQLPPKVENIEMCPMSDAQQKLYDKLFKRLKKAPNGEKRELCNVMM
QLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPTHFDADPVLIQEDMEVMSDFELHNLCKQ
YSSISSFQLEKGLLFDSGKFALLTKVLTRLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQ
FVRLDGSTPMAERIGLIDKYNTNHEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFND
KQAEDRCHRMGQTRTVQVIKLISRDSIEACMLRVGQEKLKLEQDMTTDGEEDGVMTEQMA
ELLKVSLGL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttcaatctagaccggttccgtttccaaagggacagtgcagcagacagtcac
tgtaaatcgtcggacggatccaactcggataaggagaataaacgagcccaccaaagaaag
acagatggtcgatgtgcatcaggcaaggcatacgaggatgtttctgcagatgacaaagtt
gtcaggatgagcaaggatacaacatcagtttccaagaaccagataagcaaggatatggag
gacaaaatcatcaaactaatggaaatattccctcagaagagcaagaaagatctactggag
gtggttgaaagcaccagcacgctggagggagctatagcacattgtttgatgatttacggc
gatgacgattcaagcagacagaaaggcaaagcagggcatagtgaagatgaagataacgat
cagccaaagaagaggagaaaaattttgcattcagaatctgaagaagaggaggaagaagat
tctgatgaggaggagagtcaggagacaggcagagagagacaggaggctctgttgaagaaa
ctgaagaagaaactgcctgatatagaaaaagaggtgctgagggatgtcctgagagagcat
gactggaattatgagaatgccttgggttcactgcttgtgttttcatcaacagattcaagt
tcaccagaagatcagagtaaacaaaagtcaaaatcatctcactccagggaaaaaaaggac
aagagctctcaaaagcctgactgctcgtctagcctgtcaagatggctgacggctgcacct
tctcccgtgccaaaagtctctagtgtgccttctccaaaaacacaaaaatcagcagtcggc
aaaagcatgtttaaaaacacatcatttaaacggaagaggggcgatgaatcgccattaaat
gatgtcagtacctctgaggatgaagaagagattgatagtgatgttgagagtatctctgat
gatctggactcggaggatgaggacagcatctcaggtaatctccaggacaagatcattcag
tttctccaagaagcttccctagatgagcttgctctaatatctggctgctcaatcaaaaaa
gcccggaagatcatttcgctgaggcctttcaacacttggaaagatgtgaaagagcagttc
ttcaaggataatggcctgtctatagatctggtacatggctgcaaggttgtgcttaaggag
aggcaggtggttagagaccttatgggaagatgtgagaagattgcaaagaaaatgactaaa
gatgttacccatgtcatagaagcaggcatgggctccatcaagcaacccaaaatcctgaac
agcaatttcaaactccagccatatcagctgattggcttgaagtggctgattcttctgcac
cagcacaacctgagtggcatcctggcagatgaaatggggctgggtaaaactattcaggct
atctctttcctggctcatttgtatgaaaaaggaatcaaaggccctcatcttattaccgta
ccctcatccacactggataactgggttcgtgagcttggtctttggtgtcccagtcttaaa
gttcttatttactatgggtctgtggaagaccgcagatacttgcgacaagacatcctcagt
ggcttagttgaattcaacatcatagtatccacttacaatctcacaatagggaatgaccat
gaccgcagtctgtttcgcaagctgaggctgaagtatgctgtgtttgatgagggccacatg
ctgaaaaatatgaactctctacgctaccgccacctcatggccatcaatgctgagcacaga
ttgttgctgacaggaacacctttacagaacaacctgctggagctcatgtccctcctgaac
ttcatcatgccctccatgttctccagcagcacctcacagatctccaaaatgttctcaacg
aggtcatcagaggaagaaagccgttttcacaaagaaagaattgcacaggccaaacttatc
atgaagccattcattctgagacgagtcaagagtgaggtgttgaaacagcttccaccaaaa
gtggagaacattgaaatgtgtcccatgagtgatgcccagcagaagctgtatgacaaactt
ttcaaaagactcaaaaaggctccgaatggagagaagcgggagctttgcaatgtgatgatg
cagctgagaaagatggctaatcatccattgctgcaccgccagtactacaccagtgacaag
ttggctgccatgagtaaagccatgcttaaggagccgacacattttgatgccgaccctgtg
ctgatccaggaggacatggaggtgatgtctgattttgagctgcataatttatgtaagcag
tacagctccatcagcagttttcagctggagaaagggctcctttttgactccggaaagttt
gcacttttaaccaaagtactcaccaggctcaaagaaaagggtgatagggttgtccttttc
agtcagttcactatgatgctggacattgtggagattctgctcaaacaccttgaccatcag
tttgttcgactggatggttctactcctatggcagaaaggattggtctcatcgacaaatac
aatacaaatcatgagatctttgtgttcctcctgtcgactcgggctgggggacagggaatc
aacctcgcctctgcaaacacagttatactgcatgacattgattgcaatccattcaatgat
aaacaagcagaggaccgctgtcatcgaatggggcaaaccagaacagtgcaggtgatcaag
ctcatcagcagagattcgattgaggcctgcatgctccgtgtgggacaggagaagctgaaa
ctggaacaggacatgactactgatggagaagaggacggcgttatgactgaacaaatggca
gagctgctcaaagtgtcactgggcctttga
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