Cyprinus carpio (common carp): 109063192
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Entry
109063192 CDS
T05134
Name
(RefSeq) RNA-binding protein 12B-like
KO
K24526
RNA-binding protein 12
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109063192
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109063192
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CBM-like_CFAP184
Motif
Other DBs
NCBI-GeneID:
109063192
NCBI-ProteinID:
XP_018935824
Ensembl:
ENSCCRG00000052180
UniProt:
A0A9Q9YXE2
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Position
A16:complement(5635085..5639485)
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AA seq
635 aa
AA seq
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MAVVIRLQGLRITAGSEDIRNFFTGLRIPDGGVHIIGGEREEAFIIFASDEDARRAMARS
GGCIKGSPVNLLLSSKSEMQSILEESTRRSDLKNRGMYKEVVKSPSAERGPLPFNKDQRA
DIRRPDHQEMRNRPPLSSFSETRHQREGSVSGRDELYLKLTGMPFSATKDNVYTFFSGLQ
IEDIMFLRNPRGMFNGQSLVRFATKVDAVEALKKDRQYMGPRYIQLTRCSEEQWLAEGGL
VQPDSRKRASLDRARSRSPISYKSRSRSPSHEEYCVMFENLPHMVEKRDLRVLLHPVSLK
DDQIIIFAQKKDDRTKSAVVVFRNLTDYCAGLVHNKEMLMNKVVYVSPISKEKMVTLLES
SVDVRDEGKGSRRSSEAPQPQRNNSDSQLRCLYVRNLPFDVRKVEIMDFFNGFPLSEDRV
VLLRDERGAGLGEALVIFQSEKEAMTAQSLNGQRFLGSEVMLKCITMGQMQKFGVNDQLM
DSPQERNLQRTEIYKDAPHFSNTQMPRDDCEMQPNLRPGFGGRDRFEPNFGHNDAFGPGP
DGNGRQCYGSPDQQLDGPTCLKLVNLPSQIRIDEIYDFFYGYRVIPGSASLLYDRNGAPR
RSATVAFETHREALTALQELNGRPIGTRKIQILLV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgattacagggactcagaatcacggctggttctgaggacattcgc
aatttcttcactgggctcagaatccctgatggtggggttcatataattggtggggagcgt
gaggaagcttttataatatttgcatctgatgaagatgcaagacgagcgatggcgcgctcg
ggaggctgcattaagggttctcccgtcaacttgctcctgagtagcaagtcagaaatgcag
agtattctcgaggaaagcactagaaggtctgatttaaaaaacaggggcatgtacaaggag
gttgtcaaaagtccttctgcggaacgaggccctctgccattcaataaggaccagagagca
gacataagaaggccggatcatcaagagatgaggaacaggccacctctatcttcattcagt
gagacacgacaccagagagaagggagcgtgtcagggagagatgaactttacctgaaattg
acagggatgccattctctgcgacaaaggacaacgtctatacctttttcagtgggttacag
attgaagacattatgtttttgagaaaccccagaggtatgttcaacggccagagtcttgtg
cgctttgctaccaaagtggatgcagtcgaagctctgaagaaggatcgacaatacatggga
cctcggtatatccaactaacaagatgctccgaggagcagtggctggcagaaggaggtctt
gttcagccggacagtcggaaaagagcgtccttagatcgagccagatctcgatctcccatt
tcctacaagtcaagatcacgatcgccctctcatgaagaatactgcgtcatgtttgagaac
ttgcctcacatggttgaaaagagagatttgagggtgttacttcatccggtttctctgaaa
gatgatcagattattatctttgcccaaaaaaaggatgataggaccaaatcggctgttgtg
gtgtttagaaatctcacagactattgtgctggcttggttcataataaggaaatgttgatg
aacaaggtagtgtacgtgtcgcccatctccaaggagaaaatggtcaccttgttggaatcg
tctgttgatgtgcgagatgagggaaaagggtcaagacgctcctcagaagcgccccagcct
caacgaaacaattctgattcgcagttgaggtgtctctatgtgcgcaatctcccatttgat
gttcgtaaggtggagatcatggacttctttaatggatttccgctgtcagaggatagggtt
gtcttattgagggacgaaagaggagctgggctcggtgaggctttggtgatcttccagtct
gagaaggaggccatgacggcacagtccctaaatggacagaggtttcttggatccgaagtc
atgcttaagtgcataacaatgggccagatgcagaagtttggcgtgaatgaccagttgatg
gatagcccgcaagaaaggaaccttcagagaactgaaatttacaaagatgctcctcatttt
tcaaacactcagatgcctcgagatgattgtgagatgcagcctaatttgcgcccaggtttt
ggaggtcgtgatcgctttgagcctaattttggccacaatgatgcatttgggccgggaccg
gatggtaatggacgtcagtgttatggatcacctgaccaacaacttgatggtccgacttgt
cttaaattggtcaatctaccctctcagataaggatcgatgagatttatgacttcttctat
ggatacagagtgattccaggttctgcctcattgctgtatgatagaaatggagctcccaga
cggtcagcaacggtagcattcgaaacccacagagaggcactcactgctcttcaagaatta
aatggaagaccaattggcaccaggaaaattcagattttgcttgtgtag
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