Cyprinus carpio (common carp): 109063309
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Entry
109063309 CDS
T05134
Name
(RefSeq) remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109063309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109063309
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
109063309
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
Motif
Other DBs
NCBI-GeneID:
109063309
NCBI-ProteinID:
XP_042631641
UniProt:
A0A9R0BF35
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Position
A18:complement(27528531..27539035)
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AA seq
1272 aa
AA seq
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MAALGTTAALPPDVSPGFAVVCSFLERYSSVLDLPELSFPQLERFLQETSAVPRPLIELH
IKLLRKIGKSVTPDRWEKYLVKVCQEFNSTWAWEMERKSYLEMTVECKTGILKYLCECQF
DDNLKFKTLINEEDPDKMRLQPIGRDKEGLLYWFQLDQDQNIRVYSEEQDDLDGSSWKCI
ARTRNDLADTLEQLKAEIATDQEKQDGSTSPSMEAEAAKGEVEDLKNHVSGQGDFTNSTF
NSNQSELVPKDIKKEPTDPIKPEQEEKVAEISKPKVVIDNRVSTIKTLVKEEPKDCPKPW
NAISVVMPPASIKHDPAVTSDSHEDKKELVFENVARAVKSDQQAKIPLKKRELKRSGGYD
VSNHNSNGSISTGGIIVRNPAVLPLKEQQIRKECPTKEEKGPTAIIAVPQEPKGDQMAAR
EQYVGVGVIKGPIESKRPLNENDNSSNSHHGNGNVLKTEVGSTDSARQSVLVGKSTVQAD
NGPLPCSIPEDLSKDACEKSTDVSAKASNLVEESATIEETTSVEGKVEKDGNEEDVIELK
SKTVGLSAGEKTDVEDVSKDKSLRSPRKRRLQKSKSKMQAREDGQDASSMGEVSEKDAEK
TERNEDEEVSSELQKEGIRLKIKIPLHRRTPELQHKDAEESETSNRRSLRRSARICKPSP
KASDSRDRKQDGKLSASSAAQDEEEHIEDEEAKVLPDKEMDTEVQPKSLKAKRRHRRKRW
SKIRTKNCKSKAALEREEEVEDNKSEKGDHKSETESDQSNEIPSEDACKHCGLANHPELI
LLCDMCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCERLEEQLQNLDTALKKKERAER
RRERLVYVGISVENIIPTPDGDGEDSLTEKKKDAEKTKNLGRRSTRTRKSISYRFDDFDE
AIDEAIEEDLQDPEGGGSGGGKPAAPVTNQQRNVASRESRRPVKAPAPRKRKRRRLNDLD
SDSTLDSEESEDDFQLSDSVEEEDFVVSGDGASEGDAGSNDVSEWGSGESAAENQPVSRR
TGRSAHTLGTRRSRRRPPSRRRGTSEEEDMLDSEEEEEEEEGMETEGSNEFSDSDVDVNR
RRPRRSQNSQVNYYETSESEGSRKVSNQKHSSLPHRRRLSSSNSEESILSKDFEPKESHQ
RSEKGRKCDSTREDSKHRHKREKQRRQRSSSEDDEDEEEEDGGETEDSAEDERPLRKRSN
RIETDEEEEEEEENRRGSVRWKHTPGSRGPVKHNGLVPLRAAAQDDDDDEDEEEFTGVTD
LVNFVFDSEQLS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctgggcaccacagcggctcttcctccagatgttagcccgggtttcgcggtg
gtctgctcgtttttggagcgctacagctctgttctggatctgcccgagctgtccttccct
cagctggagcggttcttacaggagacctccgcggttcctcgcccattgattgagctccat
atcaaactgctgcggaagatcggcaagtcggtcactccagacagatgggagaagtatctt
gtaaaggtgtgccaggaatttaacagcacctgggcatgggaaatggagagaaaaagctac
ctggaaatgacagtagagtgcaagactggcattttaaagtacttgtgcgagtgtcagttt
gacgacaatctcaagtttaagacattgatcaacgaggaagacccggacaagatgcgtcta
cagcccatcggtagagacaaggagggtcttctctactggttccagttagatcaagatcag
aatatacgtgtttattctgaggaacaggatgatttggatgggtcctcatggaaatgcatt
gcgaggacaaggaatgatcttgcagacacactagaacagcttaaagccgagatcgcaact
gaccaagagaagcaagacggttccaccagcccaagtatggaggcagaagctgctaaaggt
gaggttgaggacttgaagaaccatgtatcaggccaaggagactttaccaacagcactttc
aattcgaatcaaagtgagttagtgcctaaagacattaaaaaagaaccaacggatcccatt
aaaccagagcaagaagaaaaagttgctgaaatttccaaacccaaagtggtcatcgacaac
agggtcagtacgatcaaaactctcgtcaaagaagagccaaaagattgtcccaaaccatgg
aacgccatttccgtcgtcatgccccctgcttccattaaacatgacccggcggtgacatca
gactcgcacgaagacaagaaagagctggtgtttgagaacgtggctagagctgtaaagagc
gaccaacaggctaaaataccgctgaagaagagggagttgaaaaggagtggaggatatgac
gtcagcaatcacaacagcaatggaagcatcagcacaggaggtataatcgttcgcaatcct
gctgtcttgccattgaaggaacagcaaatcagaaaagaatgcccaactaaagaagagaaa
ggaccaacggccatcatcgctgtcccacaagagccaaagggtgaccaaatggcagcacga
gaacaatatgtaggtgttggagttatcaaaggtcccattgagagtaaaaggccattgaat
gaaaacgataattcttcaaatagtcatcatgggaatgggaatgtcttgaagactgaagtc
ggaagcacagatagtgcaagacagtctgtccttgttgggaaatccacggttcaagcagac
aacggtcctcttccttgtagtatccccgaggatttgtcaaaagatgcttgcgagaagagc
acagatgtgtctgcgaaagcatcaaaccttgttgaggagtcggcgacgattgaagagacc
acttcggttgagggaaaggttgaaaaagacggcaatgaagaagacgttattgagctcaaa
agcaagacggttggtttgtcagccggagaaaaaactgatgtcgaggatgtcagcaaagac
aaaagtctgagaagcccaagaaagagacgtttacaaaagtccaaatccaagatgcaagca
agagaagacggtcaggacgcatccagcatgggtgaggtttcggaaaaggatgctgaaaaa
actgaacgcaacgaggacgaagaggtatcgtcagaacttcagaaggaagggattcgcctt
aagattaagatcccgcttcatagacgaacacctgaactccagcacaaggacgcagaggag
tcggaaaccagcaatcggagatccctgcggagatctgccagaatctgcaagcccagcccc
aaagcatcagatagtcgggataggaagcaagacgggaaactttcggcctcctcagcagct
caggacgaagaggaacacatagaagacgaagaggcgaaagttcttcccgacaaggagatg
gacacggaagtacagcccaagtctcttaaggccaaacggcgacataggaggaaacgctgg
tcgaaaatccgtacgaaaaattgcaaatccaaagcagctctggagcgggaagaggaagtg
gaagacaacaaatcagagaaaggagaccacaaaagcgagaccgaatcggaccaatccaac
gagattccatctgaagatgcttgtaaacactgtgggctcgccaaccacccagaactaatc
cttctttgtgacatgtgtgacagcggctatcacacggcctgtctgagaccccctctaatg
atcattcctgatggagaatggttctgccctccctgccagcataagcttctctgtgagagg
ctggaagagcagcttcaaaatctggacacggctttgaagaagaaagagagagctgaacga
agacgtgagcggttagtgtatgtgggcatcagcgtggagaacattatacccacccctgat
ggtgatggagaggacagcttgacagagaagaaaaaagatgccgagaaaactaaaaatctg
ggcaggcgatcgactaggaccaggaaatccatcagttatagatttgatgatttcgatgaa
gccattgatgaagcaatagaggaagaccttcaagatccagaaggaggaggctctggtggc
ggtaaacctgcggcgcccgtcacgaatcagcagaggaacgtggcgagccgggagagtcga
cggcctgtgaaagctcccgccccgcgcaagaggaaacgccggcgactcaatgacctggac
agtgacagtacgctggactcggaggagagcgaggacgactttcagctcagtgacagtgtg
gaggaggaggattttgtggtttcaggagacggtgcgtctgagggagacgcgggctctaat
gacgtgagtgaatggggcagtggtgaaagtgccgccgagaatcaaccggtctccaggaga
acaggaagaagcgctcacactctgggaaccaggaggagcagacgcagacctccttccaga
cgaagaggcacctcagaggaagaggacatgctagactctgaggaagaggaggaggaggaa
gagggaatggaaacagaaggctctaacgagttcagcgacagcgacgtggacgtgaataga
aggcgtccgcggcggagtcagaactctcaggtcaactactacgagacgtcagagtctgaa
ggctcacggaaggtgtccaatcagaagcactcctctcttcctcaccgtcggcggctgtcc
agctccaacagtgaagagtccatactctctaaagactttgagccaaaggaatcgcatcag
agatcagaaaaaggacgcaagtgcgattcaacaagggaagattccaaacacagacacaaa
cgagaaaaacagagacggcagagaagctccagtgaagacgacgaagacgaggaggaggag
gatggaggagaaacagaggactctgcggaagacgagcggcccctccgcaagaggtcgaac
cgcatcgagacagacgaagaagaagaggaggaagaggagaacagacgaggaagcgtccgg
tggaagcacacgccgggctctcgaggtcccgtcaagcacaacggcttggtcccgctgagg
gccgccgctcaggacgacgacgacgatgaggacgaggaagagttcactggagtcacggac
cttgttaactttgttttcgacagtgaacagttgtcatga
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