Cyprinus carpio (common carp): 109063785
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Entry
109063785 CDS
T05134
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109063785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109063785
Enzymes [BR:
ccar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109063785
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109063785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
109063785
NCBI-ProteinID:
XP_042578645
Ensembl:
ENSCCRG00000011868
UniProt:
A0A8C1UEM7
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All DBs
Position
B4:complement(4495952..4499058)
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AA seq
341 aa
AA seq
DB search
MHFGLCSSRILCVRVCAVSFLRVCGLKTTVSMPKRAKKNEEAVEGETGNGAEPAKKEKKG
KEPEAPILYEDPPDKMSSKDGRASNMKITSWNVDGLRAWVKKNGLDWVRKEDPDVLCLQE
TKCAEKALPSAITDMPEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGR
VITAEFPSFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLSGLDQRKPLVLCGDLNVAHQ
EIDLKNPKGNRKNAGFTPEEREGFTKLLEAGFTDSFRELYPEQANAYTFWTYMMNARAKN
VGWRLDYFLLSSALLPGLCDSKIRNTAMGSDHCPITLYLAV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcattttggtttatgcagttcacgcattttatgtgttcgtgtgtgtgctgtcagtttc
ttacgtgtgtgtggtcttaaaacaactgtaagcatgcctaaaagagccaagaagaatgag
gaagctgtcgagggggagactggcaatggagctgaacctgcaaagaaagagaaaaagggg
aaggagccagaggccccaattctgtatgaagatcctccagataagatgtccagtaaggac
ggccgtgcgtccaacatgaagatcacctcctggaatgtggatggtctgcgcgcgtgggtc
aaaaagaacggccttgattgggtgcgtaaggaggatccagacgtgctgtgtctgcaggag
actaagtgcgctgagaaagccctgccatctgcgatcactgacatgcctgagtatccgcac
aagtactgggctggatcagaggataaggagggttacagcggagtcgccatgctctgcaag
actgaaccgctcaatgtcacctatggtattggtaaagaggaacatgataaagaaggtcgg
gttatcactgctgagtttccatctttcttcctggtcacggcgtatgtgcctaatgccagt
cgtggtctggtgcgactcgactaccgtaagacctgggatgtggatttccgggcctacctg
agtggcttggaccagcgcaagcccctggtgctgtgtggagatctgaatgtggcccaccaa
gagattgatctcaaaaaccccaagggtaaccgcaagaacgcaggcttcacccccgaggaa
cgtgagggcttcaccaaacttctggaggctggttttactgacagttttcgggagctatat
ccggaacaagccaatgcctacaccttctggacctacatgatgaacgctcgagccaaaaac
gtcggctggcgtttggactactttttgctgtcgtccgccttgctcccaggtctgtgtgac
agcaagatccgaaacacagccatgggaagtgaccactgtcctattaccttgtatttggca
gtgtag
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