Cyprinus carpio (common carp): 109063873
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Entry
109063873 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: F-box DNA helicase 1-like
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109063873
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109063873
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109063873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box-like
UvrD_C_2
AAA_19
F-box
Viral_helicase1
AAA_30
PhoH
AAA_11
ResIII
AAA_12
AAA_22
SbcD_C
Kelch_2
Motif
Other DBs
NCBI-GeneID:
109063873
NCBI-ProteinID:
XP_042604827
Ensembl:
ENSCCRG00000016980
UniProt:
A0A9Q9XN07
LinkDB
All DBs
Position
A4:complement(7094424..7102184)
Genome browser
AA seq
1017 aa
AA seq
DB search
MESSMRGRAKRRHLGPSECNDLLQSNTGNQSLTQPFNANLSNTDPNRGLQPRTPTKRSRQ
VSGGVGKQKGITDFFSVTGVISTSPQKGSKTPVKEENEEQELTGHLIPKEEDETEDYMEG
ITEDMFEEDFDTGTTSVKKEEEWLEVTVKKEEDEEDLVEALPDAHFGLLGVQEGQEVPKG
HVQDLPEEVLREVFAHLPADDLYRNISLVCRHWRAVVMDPQFLPWKKLYCRYRKRQNEAL
KEMKSILDDNQINKKDDLCLLNMVRYMSQFKHSKRVNVKDVLVCVKGHQLYAHAEACIKD
RMPDMVDDEGPNPWSAMALMLILADGVKDVLDLVALLRKSGCLLTAGGISEYLWAVATLL
MAMRQNNINISNRWHYNIFYVLHLMENAPPPAGLQDNRQQITHEQQQILNHDIQNHHVVK
IMAFAGTGKTTTLVKYAQQRSHMRFLYLAFNKSVAMQAQRSFPHNVECSTIHSMAFRAVG
VRYKNMRKLSNNLQVFDVAWILPKGHGGFVNAKVVTQTLHNFCASVDQHVGPQHVPHKYK
NTHGQPEYPDDHQKMTFAGIAQKLWDQMVELKSRKERVYNMTHDGYLKLWQLSRPQLDRY
DAIFIDEAQDCTPVIMGIMLSQNCGKILVGDPHQQIYTFRGAVNALHAVAHTHIYYLTQS
FRFGSEIAYVGAAVLDSCKKVKQILVGGNQDGSVRGEDTQTLQQLKLGQRLXQGSVAILS
RCNVTVFSEAVRLTDVNPNCKIYIVGGVENFGLDKIMDLWVLMQPEDKRKNESLSIKDYF
IRSFCKDKMGGFRGLKGYAMASEDRELEAKLAVVEKYNKRIPELVKRIYDRAQKSAVCAD
FILGTVHKAKGLEFDAVVVTDDFMKVPCARHNLQRVGSFNAANIQDDEWNLLYVAITRAK
RALYITKTISNILTFTGEYFLRSELTSALLSKDPSLVCSIEGCGNHITADSVLSMSKIPV
RYMDSMDAGGVLCLTCVEQRVGPTAFMLSPPERVRSMTYTNERIDLPINVAMLLSLL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgtccatgagaggaagggcaaaacgcaggcacttggggccctcagaatgtaat
gatctgctgcaaagcaacacagggaaccagtctctcacacagccttttaatgctaacctc
agcaacacagacccaaaccgaggacttcagcccaggacacccaccaaaagaagcagacaa
gtttcaggtggtgtgggaaaacaaaaaggcatcaccgatttcttctctgtcactggagtc
atcagcaccagcccccaaaaaggatccaaaactccagtgaaggaggagaacgaagaacag
gaactgaccgggcatcttatcccaaaagaagaggatgagacggaggactacatggaagga
atcactgaggatatgttcgaagaagactttgacacaggaactacgtctgttaaaaaagaa
gaagaatggttggaagttacagtgaaaaaagaagaggatgaggaggacctggtcgaagcc
ctccctgatgcccacttcgggctgctgggagtgcaggaaggccaggaggtgcccaaaggc
catgtgcaggatctgcctgaggaggtcctgagggaagtgttcgcgcacctcccggcagat
gatctctatcgaaacatcagcctggtgtgccgtcactggagggccgtcgtcatggacccc
cagtttctaccttggaagaagttgtactgcagataccgtaagcggcaaaatgaggcactg
aaggaaatgaagtctatcctggatgataatcaaattaacaaaaaggatgacttgtgtctt
ctcaatatggtgaggtacatgtctcagttcaaacacagcaaaagggtgaatgtgaaggac
gtgttggtgtgtgtgaaaggacatcagctctacgctcatgctgaagcctgcatcaaagac
agaatgccagacatggtggatgatgagggtccaaacccttggtctgccatggccctgatg
ttgattttggctgacggggtgaaagatgtcttggacctggtcgctctgttgaggaagtct
gggtgtctgctgactgcaggaggaatctcggagtacctgtgggctgtggcgactttgctt
atggccatgagacagaataatattaacataagcaacaggtggcattacaatatcttctat
gtgctgcacttgatggagaacgctcctcctcctgcgggcttgcaagacaacaggcagcaa
atcactcacgagcaacagcagatactcaaccacgacatccagaatcatcacgttgttaaa
ataatggcttttgcaggcactggaaagacgaccacactcgtgaagtatgctcagcagagg
tcacacatgcgcttcctctacctggcctttaacaaatctgtggcgatgcaagctcagcgc
tcatttccacacaacgtcgaatgcagtaccatccattcaatggccttcagagctgtggga
gtgaggtataaaaacatgaggaaactgtccaataatttgcaagtgtttgatgtggcgtgg
atcttgcctaaaggacacgggggattcgttaatgctaaagtggtgacgcaaaccctccac
aatttctgcgcatccgtagaccagcacgttggtccacaacatgttccacataagtacaag
aacacgcacggacagccagaatacccagacgaccaccaaaaaatgacatttgctggtatt
gcacaaaagttatgggaccaaatggtagagctgaagtccagaaaagagagagtgtacaac
atgacccatgatggatacctcaaactctggcagctgtcgagaccacagctggaccgatac
gatgccatatttattgatgaagctcaagactgcacaccagtcatcatgggcattatgctc
tctcagaactgtgggaaaatcctggttggagatcctcatcaacagatttacactttcaga
ggagcggttaatgctttgcacgctgttgctcacacacacatctactatcttacacagagc
ttcaggtttggatcagaaatcgcatacgttggtgctgcagtattggacagttgtaaaaaa
gtcaagcagatattggttggtgggaatcaggatgggagtgtacgaggggaggacacacaa
acactgcaacaactgaagctgggacagaggctgnnccaaggaagcgtggccattctgagc
cgctgtaatgtcactgttttcagcgaggctgtccgacttacagacgtcaaccccaactgc
aagatctacattgtgggaggtgttgaaaactttggactggacaaaattatggatctctgg
gtcctgatgcagccagaggataaacgcaagaatgagagcctttcgatcaaggattacttc
atccgaagtttctgcaaagataagatgggcggattcagaggtctgaaggggtacgccatg
gcctcggaagaccgagagctggaggccaagctagccgtggtggaaaaatacaacaaacgc
attccagagctggtcaaacggatctatgatcgcgcccagaaaagcgcagtgtgcgccgat
tttatccttggtactgtgcataaggcaaaaggcctggagtttgacgcagtggttgtgaca
gatgactttatgaaagtaccatgtgcacgtcataacctgcagagagtgggcagtttcaat
gcagcaaacatccaagatgacgagtggaacctgttatacgtggcgatcacacgagccaaa
agagcgctgtacatcaccaagaccatcagcaacattctcacattcaccggggagtacttt
ctgaggtcagagctgaccagcgctctgctgagtaaagacccatctctcgtctgctccatt
gaaggctgtgggaaccacatcaccgcagactctgtcctcagcatgagcaaaatccccgtc
agatatatggacagcatggatgcgggcggcgtgctgtgtttgacctgtgtggagcagcgt
gtgggacctacagccttcatgctctctccacctgaacgtgtcagatccatgacctatacc
aatgaaagaatagatctgcccatcaacgtcgccatgctgttatctttactttaa
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