Cyprinus carpio (common carp): 109063979
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Entry
109063979 CDS
T05134
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
ccar03083
Polycomb repressive complex
ccar04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109063979 (rbb4l)
03083 Polycomb repressive complex
109063979 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
109063979 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109063979 (rbb4l)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109063979 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
109063979 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
109063979 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109063979 (rbb4l)
PRC2.2
109063979 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109063979 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
109063979 (rbb4l)
Chromatin remodeling factors
NuRD complex
109063979 (rbb4l)
NuRF complex
109063979 (rbb4l)
NuRF complex (fruit fly)
109063979 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
109063979
NCBI-ProteinID:
XP_042622950
Ensembl:
ENSCCRG00000015329
UniProt:
A0A9Q9YMI0
LinkDB
All DBs
Position
A11:7806982..7814836
Genome browser
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
VVHRLALGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTAKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGPAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagaagtgtacgacgatgcagtggaggagagagtcataaatgaggaatac
aagatctggaagaaaaacacaccattcctgtacgatctagtcatgacacatgccctcgag
tggccgagtctgacagtgcagtggcttcctgatgtgaacaggcctgagggaaaggactac
gtggttcatcggctggcgctgggcacacacacttcagatgagcagaaccacttggttatc
gccagtgttcagatccctaatgatgacgctcagtttgacgcgtcccactacgacagcgag
aaaggagcagagtttggagggtttggatcggtgagcggaaagattgagattgaaattaag
atcaaccatgaaggagaagtgaacagagccagatacatgccacaaaacccctgcatcatc
gccaccaagacccccacgtctgacgtgctggtgttcgactacaccaaacacccatccaag
ccagaccccagtggagagtgtagtccagacctgagactgcgggggcatcagaaggaggga
tacggtttgtcctggaaccccaacctgagtggaaacttgctcagtgcatcagacgaccat
acgatctgtctgtgggacatcagtgctgttccaaaggaggggaagatagtagatgccaag
accatcttcacagggcacacagctgtggtggaggacgtgtcctggcaccttctacatgaa
tcgctgttcggatctgtggctgatgaccagaaactcatgatttgggacacacgatccaat
aacacagcaaagcccagtcattctgtggacgcccacacggctgaagtcaactgcctgtcc
ttcaacccctacagcgagttcattctggccactggctccgcagacaagacggttgcattg
tgggatctgcgtaacctgaagctaaagcttcactcttttgagtcacacaaggatgaaatc
ttccaggtccagtggtctccccataacgagaccatcctggcctccagtggcacagacaga
cgcctcaatgtttgggatctgagtaaaatcggagaagagcagtctgcggaggacgcagag
gacgggccacctgagctgctgttcattcatggtgggcacacagctaagatctctgatttc
tcctggaacccaaatgaaccttgggtaatctgttctgtgtcagaagacaacattatgcaa
gtatggcagatggctgagaacatctacaatgatgaagagccagacacccctgcgtcagag
ctggaggggccggcgtcgtaa
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