KEGG   Cyprinus carpio (common carp): 109064048
Entry
109064048         CDS       T05134                                 
Name
(RefSeq) TATA box-binding protein-like 1 isoform X1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109064048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccar03000]
    109064048
   03021 Transcription machinery [BR:ccar03021]
    109064048
Transcription factors [BR:ccar03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    109064048
Transcription machinery [BR:ccar03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109064048
  RNA polymerase III system
    TFIIIB
     109064048
  RNA polymerase I system
    SL1/TIF-1B
     109064048
SSDB
Motif
Pfam: TBP P22_Gp10_C
Other DBs
NCBI-GeneID: 109064048
NCBI-ProteinID: XP_018936607
Ensembl: ENSCCRG00000040300
UniProt: A0A8C1MLM7
LinkDB
Position
A23
AA seq 186 aa
MEPSNDVALDIIITNVVSVFRTRCHLNLHTIGLEGSNVIYKPEMGKVLMKLRKPRITASI
WSSGKIICTGATSEEEAKLGARRLARCLQKIGFKVRFSDFKVVNVLAVCSLPFQIRLIEF
TKNNRPIASYEPEIHPAASYRIKNLRSTVQVFSTGSITVTGPNVQSVASAVEQIYPLLFE
CQKTRS
NT seq 561 nt   +upstreamnt  +downstreamnt
atggaacccagtaatgatgtggcgcttgatatcattattaccaatgtcgtatctgtcttc
agaaccaggtgccatctaaacctgcacaccattggcctagaggggtctaatgtcatctac
aagcctgagatgggaaaagtcctgatgaagctgcggaaaccgcgtatcactgcctctata
tggtcatcagggaaaattatttgcactggagcaacaagtgaggaggaagccaaactaggt
gctcgacggttggcccgctgcctgcagaagattggattcaaggtgaggttctcggacttt
aaggttgtcaatgtgttggcagtgtgctccttgccttttcaaattcgtctcattgagttc
actaagaataatcgccctattgccagctatgaacccgagatccatcctgctgcgtcatac
aggattaaaaacctcaggagtacagtacaggtgttttccacaggcagtatcactgttaca
ggaccaaatgtgcagagcgtggcatctgcagtggagcagatttatcctctactgtttgag
tgtcagaaaacacggtcataa

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