Cyprinus carpio (common carp): 109064217
Help
Entry
109064217 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04517
IgSF CAM signaling
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109064217
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109064217
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccar04812
]
109064217
Cytoskeleton proteins [BR:
ccar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109064217
Intermediate filaments
Intermediate filament-binding proteins
109064217
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
SOS1_NGEF_PH
LTXXQ
CAMSAP_CH
PHA_gran_rgn
PMC2NT
Motif
Other DBs
NCBI-GeneID:
109064217
NCBI-ProteinID:
XP_042589392
Ensembl:
ENSCCRG00000020626
LinkDB
All DBs
Position
B11
Genome browser
AA seq
2354 aa
AA seq
DB search
MTTVAAEYDHMDIQHQYQESVNNRWEDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRAPGRRSSSKASAIGGSRVPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKXVFRL
SCFLALSVKCVGCEAGAVLLWQAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAA
MRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVLAVVAVARELETEN
YHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIMDWMDEMKMLLL
SQDYGKHLLGVEDLLQKHALVEADIGIQADLVKAVNANAQKFAVDDEGYKPCDPQVIRDR
VAHMEFCYQELSQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDCGKDLTG
AVRLLSQHRALEDEMSGRSGHLQHTVREGQAMADAGHFGEDKIRERITHNQAQLEHLEQL
TKKSMEEACSLHQHHQNQDDAHHAYTLNSLRTPLILSDSDHDQLXNPNSSQEXKKHKDAS
AEVASYRSVIDALHEQAQSLPPEQVQAANVNERLAGIEERYKEVSELSRLRKQALQDALA
LYKMFSEANACEHWIDEKEQWLISMEIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQ
IARQLIHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYHLDCNETKSW
IREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEAERLAGEHPDQA
KAITGRLAEITAVWEEMKETLRNREASLGEASKLQQFLRELDDFQSWLSRTQTAIASEDS
PHADPRHEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTG
WNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKK
QEDFMTTMDANEDKINSVVEAGRRLASDGNINADRIQERAASIDDRHKKNREAAVELLMR
LKDNRDLQKFLQDCQELSLWINEKMLTAQDMLTATGHVPTDEALATCTAQWLKHPGPFMA
PKMPPSNKDCWTKIEKEGKQLVSEKPETEAVVKEKLAALQKMWTELETTTQTKAQCLFDA
NKAELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVSILLKKQQMLENQVEVRQMGGVRS
FQSQAHVLKQEGKDPDEVDGRRKEVELKFKELLEPLKKRKDFLTASREIHQFNRDMEDEI
LWVEERMPLADTMDTVQLLIKKNQTLQKEIQGHQPRCDDILERSQSILKADSPDVEAXEP
VSDLQQLWSLIIQETEETATARLEEAHKAQQYYFDAAEAEAWDGEGQVLYLHAAFPKCLP
RCSQDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDK
LYAGLKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQE
RFREFARDTGNIGQERVDGVNRMADDLINAGHTDAATVAEWKDGLNEAWADLLELIDTRT
HIIPPSNNFHNYYNDTKEIILHNPXKHKKLPEXLGRDQNTVETLQRMHTTFEHDIQALGT
QVRQLQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRTRLLDTGDKFRFFS
MVRDLMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTVCIELGKSLL
ARKHYASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEP
YLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEEKRR
KPPTPEPVEAQDAETQQREGEQIAQNGLPSDQDSPRDGVDGEMNGVPERSSKEPSPVPSP
SADRRGKGSQSATLPAKGQETLSAQLEGLLHRKHEWEGHNKKASSRSWHNVYCVINNHEM
GFYKDNKSAAQGVPYHSEIPISLKDAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEE
MNTWIQAIQNAGSGSSSSEKSEITPSNQSTPASSRAHTLPATVTLTTESSPGKREKDKEK
DKEKRFSLFSKKKQ
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagaatacgaccacatggacatccagcatcaataccaggagagt
gtcaacaaccgctgggaagacgaatgggacaatgagaacagctcggcccgattattcgag
cgctcgcgcatcaaggctctagcagatgagcgagaggccgtgcagaagaagaccttcacc
aaatgggtgaactcacacttggcacgcgtgtcctgtcggatcacggatctctacatggac
ctgagggcacctggacgacggagctcatccaaggcgtctgcgataggaggttctagagtg
cccaagccgacaaagggccgcatgcgaatccactgtctggagaacgtggacaaggccctg
cagttcctcaaggagcagcgcgtgcatctggagaacatggggtcacatgatatcgtggac
ggaaaccaccgactcacgctcggactcatctggaccatcatcctccgcttccagatccaa
gacatcagcgtagagaccgaagacaataaagagaaacgctcagccaaggacgcgctgctc
ctgtggtgccagatgaagaccgcaggctatcccaacgtcaacatccacaacttcaccacc
agctggcgtgatggcatggctttcaacgccctcattcacaaacacaggccagacctgatt
gatttcgacaaactgaagaagtccaacgctcactataacctgcagaacgccttcaacctg
gcggagcagcacctggggctcaccaaactcctggacccagaagatatcagcgtagaccat
cctgacgagaagtctgtcatcacttatgtcgtcacatactaccattatttctccaagatg
aaggcgctgaaggtggagggcaaacgtatcggaaaggtgctggacaacgccatcgagacc
gagaagatgatcgagaaatatgaatctctggcgtctgatctgctggagtggattgagcaa
accatcatcatcctcaacaaccgcaagtttgcaaactctctggtaggagtccagcagcag
ctccaggccttcaacacttacaggaccgtagagaaaccacccaagtgagtattcagactc
agttgttttctagctctgtcagtgaaatgtgttggatgtgaagctggagctgtgttgttg
tggcaggcgtgggagcgtctggagaaggctgagcacgagcgtgagctggcgctgaggacc
gagctgattcgacaggagaagctggagcagctcgccagacgcttcgaccgcaaggctgcc
atgagggagacctggctgagcgagaaccagcgcctcgtctcacaggacaatttcggattc
gacctccaggcggtcgaggctgctaccaaaaaacacgaagccatcgagacggacatcgcg
gcgtacgaggagcgcgtgctggcggtggtggccgtggccagagagctggagacggagaac
taccacgacatcaagcgcatcgccgcgcgcaaagacaacgtgctgcgcctgtgggagtat
ctgctggagctgctcaaagcccgcaggcagcggctggagatgaacctcggcctgcagcgc
gtcttccaggagatgctctacatcatggactggatggacgagatgaagatgctgctgctg
tctcaggattacgggaagcatctgctgggagtggaggatctgcttcagaagcacgctctg
gtggaggccgacatcggcatacaggccgacctcgtcaaggccgtcaacgccaacgcacag
aagtttgccgtggatgacgagggctacaaaccctgtgaccctcaggtcatccgtgaccgt
gtggcccacatggagttctgctatcaggagctgagccagctagcagcggagcgccgcgcc
cgtctggaagagtcccgccgcctgtggaagttcttctgggagatggcggaggaggagggc
tggattcgcgagaaagagcagattctgtcctcggacgactgtggcaaggatctgacgggc
gccgtgcgtctcttgagtcaacaccgcgctctcgaggatgaaatgagcggccgctccggt
cacctccagcacacggtgcgcgagggtcaagccatggccgacgctgggcacttcggcgaa
gataagattcgcgaacgcatcacccacaaccaggcccaactggaacatctggaacagctg
actaaaaagagcatggaagaggcttgcagcctccatcagcaccaccagaaccaagacgat
gcacatcacgcctacaccttaaactcactacgaaccccgctaatcctctccgactctgac
cacgatcaactatgaaacccaaactcaagccaagaanacaaaaaacacaaagacgcctcg
gctgaggtcgctagttatcgctcggtgattgacgctcttcacgaacaggcccagtccctg
cctccggaacaggtgcaggctgccaatgtcaacgagcggctggcgggcatcgaggagcgc
tataaggaggtctccgagctcagcaggctgaggaaacaggccctgcaggatgccctggcg
ctctataagatgttcagcgaggcgaatgcgtgtgagcactggatcgatgagaaggagcag
tggctcatcagcatggagatcccagagaaactggaggacctggaggtcattcagcacagg
tttgagagtctggagcctgaaatgaataaccaggcgtcacgcgtagcggttgtcaatcag
atcgccaggcagctcattcacagcggacacccgagtgagaaagacatcaaagcccaacaa
gacaaactcaacaccaggtggagtcaattccgtgacctggtggaccagaagaaagagtcc
ctcaactcggctttgggcgtgcagaactaccacctggactgtaacgagaccaaatcctgg
atccgcgagaagaccaaagtcatcgagtccacccaggagctgggcaacgacctgacgggc
gtcatggccctccagcgcaagctcaccggcatggagcgcgatctggccgccatcgaagcc
aaactgggcgacctccgcggcgaggcggagcgcttggccggcgaacaccccgaccaggcc
aaagccatcacgggacggctggccgagatcaccgccgtctgggaggagatgaaggaaacc
ctacgaaaccgcgaggcgtctctcggggaagccagcaagctgcagcagttcctccgagag
ctggacgatttccagtcctggctttcccgcacgcagacggccatcgcgtccgaggacagc
ccacacgctgacccgaggcacgagaagcttctggcccaacacgaaggcatcaagaacgag
attaacaactacgaagaggactaccagaagatgagggacatgggcgagatggtgacacag
gggcaaacggacgctcagtacatgttcctgagacagaggctccaggctctggataccgga
tggaacgagctccataagatgtgggagaacaggcagaaccttctgtcacagtctcacgcc
tatcagatcttcctcagagacaccaaacaagccgaggccttcctcaacaaccaggagtat
gttctggctcataccgagatgcccaccacccttgaaggagcagaggctgccataaagaaa
caggaggacttcatgaccaccatggacgccaacgaggacaagatcaacagtgtggtggag
gcaggcaggagactggccagtgacggaaacatcaatgctgaccgcatccaggagagagca
gcctccatcgacgaccggcataagaagaaccgtgaggcggccgtggagctgctcatgagg
ctgaaggacaacagagacctgcagaagttcttgcaggactgccaggagctgtccctgtgg
atcaatgagaagatgttgacagcacaggacatgttgacagccacgggacatgtccctacg
gatgaagcgctcgcaacctgcacagcacaatggctcaaacacccaggccccttcatggcc
ccgaaaatgccgccgtccaacaaagattgctggacaaaaatcgagaaggaagggaagcag
ctggtctcggagaagccggagacagaagccgtggtgaaggagaagctggcggcgctgcag
aagatgtggaccgagctggaaaccacgactcagactaaagcccagtgtctgtttgacgcc
aacaaagccgagctcttcacgcagagctgcgccgatctggacaaatggctggtgggtctg
gaaggtcagatccaatcggacgactacggcaaagatctgaccagcgtcagcatcctgctg
aagaaacaacagatgctggagaaccaggtggaggtgcgtcagatgggaggtgtgaggagc
ttccagtctcaagctcatgtgttgaagcaggaaggaaaggacccggacgaggtcgacgga
cgccggaaggaggtggagctgaagtttaaggagctgctggagccgttgaagaaacggaag
gacttcctcacggcctctcgagagattcatcagtttaaccgtgacatggaggatgagatt
ctctgggttgaggagcggatgcctctcgctgacaccatggacactgttcagctgctcatc
aagaagaaccagacattacagaaggagatccagggccatcagccgcgctgtgacgacata
ctcgagcgcagccagagcatcctgaaggccgacagtccagacgtagaggctnccgagccc
gtctctgacctgcagcagctgtggagcctgatcatccaggagacggaagaaacggccacc
gccagactcgaggaggcacataaggcccagcagtactactttgacgcagctgaagccgaa
gcctgggatggagaaggccaagttctatatttacatgctgcttttccgaaatgtctccct
cgttgttctcaggatgagcagagttcggtggccatgctgaagaagcaccagatcctggag
caggcggtggaggactatgctgaaaccgtgcaccagctttccaagaccagccgaggcctg
gtggccgccaaccaccccgagagtgagaggatcggcatgcgtcagtcacaggtggataag
ctgtacgccggactgaaggacctatcagaggagaggagaggcaaactggaggagcgcttc
cgcctcttccagctcaaccgggaggtggacgatctggagcagtggatcgccgagagagag
gtggtggctggatctcacgagctcggacaagactacgaacacgtcactatgttgcaggag
cgtttccgtgaattcgctcgcgacacgggaaacatcggtcaggagcgcgtggacggcgtg
aaccgtatggctgacgatctgataaacgcagggcacactgacgcggcgactgtggccgag
tggaaggacggtctgaacgaggcctgggccgatctgctggagctcatcgacacacgcact
cacatcatcccaccatccaacaacttccacaactactacaacgacaccaaggaaatcatc
ctacacaacccataaaaacataagaagcttccagaatagctgggacgagaccagaacacg
gtggaaaccttgcagaggatgcacaccacgtttgaacacgacattcaagctctagggaca
caggtcaggcagctgcaggaggacgctgtgcgcctgcagtcagcgtatgctggagacaaa
gcggacgacatccagcggcgtgagggcgaggtgctggaggcctggaggagtctgctggag
gcctgcgagggtcggcggacgcgactgctggacaccggagacaagttccgcttcttcagt
atggtgcgcgacctcatgctctggatggaggacgtcatccgcctcatcgagacgcaggag
aagcccagggacgtgtcgtctgtggagcttctcatgaacaaccaccagggaatcaaggct
gaaatcgatgcccgtaacgacagcttcacggtctgcatcgagctgggcaaatctctcctg
gcacggaaacactatgcatcagaggagatcaaagagaagttgttgcagttgacagacaag
aggaaagatatgattgacaagtgggaggacagatgggagtggcttagactgattctggaa
gtgcaccagttttcgagggacgccggtgtggcagaggcgtggctgctgggacaggagccg
tatctgtccagcagagagatgggacagagtgtggacgaggtggagaagctgatcaaacgc
cacgaagcgttcgagaaatctgccgccacttgggaggagcgcttctcagcgctggagcga
ctgactacgttggagttattggaagtgagaagacagcaagaggaagaagagaagaggagg
aaaccgcccacaccagagccggtcgaggcgcaggatgcagaaacacagcagagagaagga
gagcagattgcccagaacggactgccatcagaccaggactctccacgggatggggtggac
ggagagatgaacggagtgcctgagaggagctcgaaggagccgagtcccgtcccgtctccg
agcgcagacagacggggtaaaggcagtcagtcagccacactgccggcgaagggtcaggag
acgctgtctgcgcagctggagggactcctgcaccgcaaacacgagtgggagggacacaac
aagaaagcctccagcagatcctggcataacgtgtactgcgtcatcaacaaccacgagatg
ggcttctacaaagacaacaagagcgcggcgcagggcgtcccgtaccacagcgagatcccc
atcagcctgaaggacgccgtctgcgaggtggccgtcgactacaagaagaagaagcacgtc
ttcaagctcagagttactgatggaaacgagtatctcttccaagccaaagatgatgaggag
atgaacacatggatccaggccattcagaacgccggcagcggctcctcatcctccgagaaa
tcagagatcacacctagcaaccagagcacaccggcctccagccgcgctcacacgctcccg
gcaaccgtcaccctgacgaccgaatccagccccggcaagcgcgagaaggacaaggagaag
gacaaggagaagcgcttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
