Cyprinus carpio (common carp): 109064421
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Entry
109064421 CDS
T05134
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109064421
Cilium and associated proteins [BR:
ccar03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
109064421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_6
TPR_14
TPR_16
TPR_7
ANAPC3
TPR_11
TPR_9
TPR_17
ARM_TT21_5th
SNAP
TPR-S
TPR_10
TPR_CcmH_CycH
ARM_TT21_4th
TPR_MalT
DUF2225
ARM_TT21_2nd
HAT_PRP39_C
TPR_15
RPN7
ARM_TT21_C
Coatomer_E
SHPRH_helical-1st
DUF6584
Consortin_N
RNPP_C
HEAT_Nup120
TPR_4
Evf
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
109064421
NCBI-ProteinID:
XP_042619443
Ensembl:
ENSCCRG00000043153
UniProt:
A0A9Q9YFW2
LinkDB
All DBs
Position
A9:complement(12479961..12492602)
Genome browser
AA seq
905 aa
AA seq
DB search
MITPWIGAQKTIIRTFRNMENVHLVPEEEEDDLYTGYNDYNPTFDGEDLHNDEGFQQAVR
TSHGRRPPMTAKYPGTAIGGRPIGTAYGSRIPVGTAMGRPMTGAVQDGAARPMTAVRAAG
YSSSIARGSVFDPLGQAKGPAPPLETRNEDTPEEKIKILEKKVNDLIEESCLAHARGDLQ
LSLEKAKEAGRKERALVRQREQTGTADHINLDLTYSVLFNLANQYANNDMYTEALNTYQV
IVKNKMFSNAGRLKVNMANIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVF
IHMGQYSDAITSFEYIMSESPNIKTGFNLILCYYAIGDRERMKKAFQKLICVPLGIDDDD
KYIPPNDDPHANMVIEAIKNDKLHQMERERKALAEKYIMTSAKLIAPAIESSFAAGFDWC
VDMVKGSQYVELANDLEINKAITYLRQRDFKQAEAVETLKMFEKKDSRVKSAAATNLSFL
YFLEKDYDQADRYAELAMSADRYNPAALVNKGNTEFVKEDYEKAAEFYKEALHNDSSCTE
ALYNLGLTYKRLGRLEEALDCFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLT
SVTPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKA
IQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCT
DMGLKEVQDYATKLKKVEKMKEIREQRVRSGRDSSARGRREGSAGSDVDLLLGDVQLSGS
GSAGFKGCSSNPKKPSGSSSSPINTPPLRASVSRSEAKYSPVLEQGRDSGQSNHGTSAKG
ERLSVKLKTLPGSNEPYEASTQQEIDASYVDPLGPQMQRPKTAARKRTEEDEFADEELGD
DLLPE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgataactccttggattggagcgcagaagacgatcatacgtacatttagaaatatggag
aacgtgcatcttgtcccagaggaagaggaggatgatttgtacactggctacaatgattac
aatccgacttttgacggagaggaccttcacaatgatgagggctttcagcaggcagtcagg
actagtcatggcagaagaccaccaatgaccgcaaaatatcctggcactgccattggaggg
cgaccgattggaacagcttatgggtctcggatacctgttggcactgctatgggaaggcct
atgactggagctgttcaggatggtgcagctcgtcccatgactgcagtacgagcagcagga
tattcgtcttctatagctagaggctcagtgtttgatccactgggacaagcaaaaggaccg
gcccctccattagaaacaaggaatgaagacactccagaggagaagataaagatcctcgaa
aagaaggtgaatgatttgatagaggagagctgtctcgctcatgctcgtggggatcttcag
ctgtctttagagaaagccaaggaggctggcaggaaggaaagggctttggtgagacagaga
gaacaaacaggcactgcagaccacatcaatctggacctgacctactccgtgttatttaat
ttagcaaaccaatatgccaataatgacatgtacaccgaggccttgaacacttaccaagtc
attgtgaagaacaaaatgttcagtaatgccggacgattgaaagtgaacatggcaaatatc
tatttcaagcaaaagaactacacaaaggcaatcaaattttaccgcatggctttggatcag
atctcaaatgcccacaatgcaatgaggatcaagatcatgcagaacatcggagttgtgttc
atacatatgggccagtactccgatgccatcacatcctttgagtacatcatgagtgagagc
cccaacataaagacaggcttcaatctcatcctatgttactatgccattggagaccgtgag
aggatgaaaaaagcttttcagaaactcatttgtgtgcctctcggtattgatgatgatgac
aagtatatccctccaaatgatgaccctcatgcaaacatggtgattgaggctataaagaac
gataagcttcaccaaatggaaagggagaggaaagcactagcagaaaaatacattatgacc
tcagccaagcttatcgctccagctattgagtcgtcatttgcagctgggtttgactggtgt
gtggacatggtgaaaggttcacaatacgtggagcttgccaatgacttggagatcaataaa
gctattacatacttaagacagagggacttcaaacaggctgaggcagttgagacgctaaag
atgtttgagaagaaggacagtcgggtaaaaagtgctgctgccactaatctttcttttctt
tactttttggaaaaggattatgatcaggctgaccgctatgctgaacttgccatgagcgcc
gaccgctacaaccctgctgccctcgttaacaaaggcaacacagaatttgtgaaggaggac
tatgagaaagcagcagagttttataaggaggctcttcataatgactcgtcctgcactgaa
gctctctataacttaggtttgacctataagaggctgggtagactggaggaagccctggac
tgcttcctcaaactgcatgctatcctcagaaacagtgctcaggtcatgtaccagctggct
aatctatatgagatgttggaggaccctcatcaggccattgaatggctgatgcagctcaca
agtgtgacccccacagatgctcaggtgttggccaaactgggagacctttatgataatgaa
ggagacaagtctcaggccttccagtactattatgagtcgtataggtattttccctcaaac
attagtgtcattgaatggctgggagcatattacattgacacccagttctgtgaaaaagct
attcagtactttgagagagctaccctcattcaaccgacacaggtgaagtggcagctgatg
gtggctagctgttacaggagaagtgggaattatcagaaggcacttgagacctacaaggac
attcatcggaaatttcctgaaaatgttgaatgtctacgcttcctagtcaggctgtgcaca
gatatgggactaaaagaggtgcaggattatgccaccaaactcaagaaagttgaaaaaatg
aaggagatcagagagcagagggtgagatctggcagggacagcagtgctcgaggccgcagg
gaaggcagcgctggcagtgatgtggatctcttgttaggtgatgtccaattatcaggttca
ggcagtgccgggttcaaaggatgcagctcaaaccccaagaagcccagtgggagcagctca
agccccatcaatacccctcctctgagagccagtgtttctcgctcagaagctaagtatagt
cctgtgctggagcagggcagagacagtggacagagcaaccatggcaccagtgctaagggt
gagaggcttagcgttaaactgaaaactcttccagggtccaatgagccgtatgaggccagc
actcagcaggaaatagatgcttcgtatgttgatcctttggggcctcaaatgcagagacca
aaaactgcagcaaggaaacgcactgaggaagatgagtttgctgatgaagagctgggagat
gacttactgcctgagtga
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