Cyprinus carpio (common carp): 109064421
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Entry
109064421 CDS
T05134
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109064421
Cilium and associated proteins [BR:
ccar03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
109064421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_6
TPR_14
TPR_16
TPR_7
CFAP70_TPR_C
TPR_11
ANAPC3
RMD1-3
TPR_9
TPR_17
ARM_TT21_5th
DUF6340
TPR_CcmH_CycH
TPR-S
TPR_10
CNOT10_TPR
TPR_YpiA_C
ARM_TT21_4th
TTC22_N
ARM_TT21_2nd
TPR_MalT
HAT_PRP39_C
DUF2225
TPR_YpiA
CFAP70_mid_TPR
TPR_Psidin_N
TPR_INTS8
TPR_15
Coatomer_E
DUF6584
ARM_TT21_C
Consortin_N
RNPP_C
TPR_4
Evf
SUCH1_C
RMD9_mid
Motif
Other DBs
NCBI-GeneID:
109064421
NCBI-ProteinID:
XP_042619443
Ensembl:
ENSCCRG00000043153
UniProt:
A0A9Q9YFW2
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All DBs
Position
A9:complement(12479961..12492602)
Genome browser
AA seq
905 aa
AA seq
DB search
MITPWIGAQKTIIRTFRNMENVHLVPEEEEDDLYTGYNDYNPTFDGEDLHNDEGFQQAVR
TSHGRRPPMTAKYPGTAIGGRPIGTAYGSRIPVGTAMGRPMTGAVQDGAARPMTAVRAAG
YSSSIARGSVFDPLGQAKGPAPPLETRNEDTPEEKIKILEKKVNDLIEESCLAHARGDLQ
LSLEKAKEAGRKERALVRQREQTGTADHINLDLTYSVLFNLANQYANNDMYTEALNTYQV
IVKNKMFSNAGRLKVNMANIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVF
IHMGQYSDAITSFEYIMSESPNIKTGFNLILCYYAIGDRERMKKAFQKLICVPLGIDDDD
KYIPPNDDPHANMVIEAIKNDKLHQMERERKALAEKYIMTSAKLIAPAIESSFAAGFDWC
VDMVKGSQYVELANDLEINKAITYLRQRDFKQAEAVETLKMFEKKDSRVKSAAATNLSFL
YFLEKDYDQADRYAELAMSADRYNPAALVNKGNTEFVKEDYEKAAEFYKEALHNDSSCTE
ALYNLGLTYKRLGRLEEALDCFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLT
SVTPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKA
IQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCT
DMGLKEVQDYATKLKKVEKMKEIREQRVRSGRDSSARGRREGSAGSDVDLLLGDVQLSGS
GSAGFKGCSSNPKKPSGSSSSPINTPPLRASVSRSEAKYSPVLEQGRDSGQSNHGTSAKG
ERLSVKLKTLPGSNEPYEASTQQEIDASYVDPLGPQMQRPKTAARKRTEEDEFADEELGD
DLLPE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgataactccttggattggagcgcagaagacgatcatacgtacatttagaaatatggag
aacgtgcatcttgtcccagaggaagaggaggatgatttgtacactggctacaatgattac
aatccgacttttgacggagaggaccttcacaatgatgagggctttcagcaggcagtcagg
actagtcatggcagaagaccaccaatgaccgcaaaatatcctggcactgccattggaggg
cgaccgattggaacagcttatgggtctcggatacctgttggcactgctatgggaaggcct
atgactggagctgttcaggatggtgcagctcgtcccatgactgcagtacgagcagcagga
tattcgtcttctatagctagaggctcagtgtttgatccactgggacaagcaaaaggaccg
gcccctccattagaaacaaggaatgaagacactccagaggagaagataaagatcctcgaa
aagaaggtgaatgatttgatagaggagagctgtctcgctcatgctcgtggggatcttcag
ctgtctttagagaaagccaaggaggctggcaggaaggaaagggctttggtgagacagaga
gaacaaacaggcactgcagaccacatcaatctggacctgacctactccgtgttatttaat
ttagcaaaccaatatgccaataatgacatgtacaccgaggccttgaacacttaccaagtc
attgtgaagaacaaaatgttcagtaatgccggacgattgaaagtgaacatggcaaatatc
tatttcaagcaaaagaactacacaaaggcaatcaaattttaccgcatggctttggatcag
atctcaaatgcccacaatgcaatgaggatcaagatcatgcagaacatcggagttgtgttc
atacatatgggccagtactccgatgccatcacatcctttgagtacatcatgagtgagagc
cccaacataaagacaggcttcaatctcatcctatgttactatgccattggagaccgtgag
aggatgaaaaaagcttttcagaaactcatttgtgtgcctctcggtattgatgatgatgac
aagtatatccctccaaatgatgaccctcatgcaaacatggtgattgaggctataaagaac
gataagcttcaccaaatggaaagggagaggaaagcactagcagaaaaatacattatgacc
tcagccaagcttatcgctccagctattgagtcgtcatttgcagctgggtttgactggtgt
gtggacatggtgaaaggttcacaatacgtggagcttgccaatgacttggagatcaataaa
gctattacatacttaagacagagggacttcaaacaggctgaggcagttgagacgctaaag
atgtttgagaagaaggacagtcgggtaaaaagtgctgctgccactaatctttcttttctt
tactttttggaaaaggattatgatcaggctgaccgctatgctgaacttgccatgagcgcc
gaccgctacaaccctgctgccctcgttaacaaaggcaacacagaatttgtgaaggaggac
tatgagaaagcagcagagttttataaggaggctcttcataatgactcgtcctgcactgaa
gctctctataacttaggtttgacctataagaggctgggtagactggaggaagccctggac
tgcttcctcaaactgcatgctatcctcagaaacagtgctcaggtcatgtaccagctggct
aatctatatgagatgttggaggaccctcatcaggccattgaatggctgatgcagctcaca
agtgtgacccccacagatgctcaggtgttggccaaactgggagacctttatgataatgaa
ggagacaagtctcaggccttccagtactattatgagtcgtataggtattttccctcaaac
attagtgtcattgaatggctgggagcatattacattgacacccagttctgtgaaaaagct
attcagtactttgagagagctaccctcattcaaccgacacaggtgaagtggcagctgatg
gtggctagctgttacaggagaagtgggaattatcagaaggcacttgagacctacaaggac
attcatcggaaatttcctgaaaatgttgaatgtctacgcttcctagtcaggctgtgcaca
gatatgggactaaaagaggtgcaggattatgccaccaaactcaagaaagttgaaaaaatg
aaggagatcagagagcagagggtgagatctggcagggacagcagtgctcgaggccgcagg
gaaggcagcgctggcagtgatgtggatctcttgttaggtgatgtccaattatcaggttca
ggcagtgccgggttcaaaggatgcagctcaaaccccaagaagcccagtgggagcagctca
agccccatcaatacccctcctctgagagccagtgtttctcgctcagaagctaagtatagt
cctgtgctggagcagggcagagacagtggacagagcaaccatggcaccagtgctaagggt
gagaggcttagcgttaaactgaaaactcttccagggtccaatgagccgtatgaggccagc
actcagcaggaaatagatgcttcgtatgttgatcctttggggcctcaaatgcagagacca
aaaactgcagcaaggaaacgcactgaggaagatgagtttgctgatgaagagctgggagat
gacttactgcctgagtga
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