Cyprinus carpio (common carp): 109064672
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Entry
109064672 CDS
T05134
Symbol
acin1b
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
ccar03015
mRNA surveillance pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109064672 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
109064672 (acin1b)
03015 mRNA surveillance pathway
109064672 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109064672 (acin1b)
03041 Spliceosome [BR:
ccar03041
]
109064672 (acin1b)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109064672 (acin1b)
Spliceosome [BR:
ccar03041
]
Complex C
Other components
EJC/TREX
109064672 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
109064672
NCBI-ProteinID:
XP_042583306
UniProt:
A0A9Q9WH49
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Position
B7:14009538..14027736
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AA seq
1261 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKVALEQRGLAKSGQKNALIKRLKGALMLENLQRTSTHQ
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREATEADETQSPAGPEEDEHTP
TKDSTSFLPEKHHIVHSHLSATQAGGGGLPQDPGLLGSHKLDTGPVPVSQESSDTKAGRI
WHPSFPPGHEEVATPSPPRAVASLSVRVVGQPERQGLPLMMPRAQEREGTAPVEAGPAHS
VLQLSRSARAAACAQVDSDDNDEDDDDDSDDDDEWGPTSHGKKNVRAPPVHTPPPAAAPQ
RSRRKLQPPQHIPPQPQPVHQPPLQLRQPTPPPSPPPELSFPLPDTPKQSPHDQDEAAGL
AEGAAPGADVVSPPSLKRQESSSSSRSSSPEPPSTRRPGPLSLLVRKMESEGVFDGTQKA
GMEGEGEMEVEEQEDGEAEVQDSAQQLLGSEASVSVPTAKHDAEDSELKEERDEQKKSEE
KEYENVDEISAPFHLTSPTTFPTRRPHIFSAVPPPDSLTSSSKPEQVSVLTSEPKCSEDV
AMEAEASTTTPESKHEEGKEVKVLEKEPPEQSPKPAEESEKSLKSAHSTSEEGEMEKTRD
HSRREKGHKRRSSTPSQSSSSDTDSESSSSHSSSSPSQDKSSAPSKKKDEEENRRDDVKE
EKKAQSSRDVKQEALSEPAGQVAMELEGRSHSESAMQQPDHQGADSSDXRPEESSTVKSF
AARKISLSSKTEITSSEAEPVGGASRKRRWGSSTAVTAKKPSISITAESLKTLIPDIKPL
QEAVVELHPDEGRLSGDEDSSEPREREEPEEDQGLKIRRTVTQVIPSDGHENGQKEIKEE
EEDDEEQKWTKGETEKNKGTGENSPDVTMEIQEAEPKKVTPNDSLVRRSISQQKSGVSVT
IDDPIRTGRQLSPPRGXTSNIIHVCNLVRPFTLGQLKELLNRTGTLVEEGFWIDKIKSHC
YVTYSTIEEAVATREALHGVKWPTSNPKVLRVDFCEQDELDFHKGLVSSERAGEGQDPHA
SATSARPAAHHPLPPANHEKEKERERERDGGAAAVRDQWAERERAMERRERTRSEREWDR
DKVKDFGKEDRDRTRRSRSRDQRRRERGKSKEKRTEKKDKPEEPPVKLLDDLFHKTKAAP
CIYWLPLTEEQATQRALERAERIKEREKRRKELQEEEDKKQEERRERAKGRDREGGNAGG
AGVVRRSTEGERDRGKEREREGGREAEKRRDVHRGRGSDSKTAGGSRSSQSRSISSRDRR
H
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaggatgttacgttagacggcaaaccgcttcattcgcttcgtgtggcg
gatttaaaagtcgccctggagcaaagagggctcgctaaaagtggacagaaaaatgcactc
attaaacggctgaaaggggctcttatgttggagaatctccaacgaacatctacccatcaa
attggtcttcaacccaattctcagattggagaggagatgagtcagaacagctttataaag
cagtacctggccaaacagcaggagctcctccgacagagactggagagagaagcccgggag
gccactgaggcagatgagacacagagtcctgctggtcctgaggaggatgaacacacacca
accaaagatagcacttcctttctaccagagaaacatcacatcgtacactctcatctgtct
gcaacccaggcaggcggaggagggttgccacaggaccctgggttattgggatcacacaag
ttggatacaggccctgttccagtgtctcaagagtcatctgacactaaagctggaaggatc
tggcatccttctttccctcccggccatgaggaggttgcaacaccctctcctccacgtgca
gttgcctccttgtctgtgcgcgtggttggacaacctgagcgtcagggcttgcctctcatg
atgccccgtgcccaagagagagagggaacggccccagtcgaagcaggtcctgcccattcg
gtgttgcagctgagccgttccgcgagggctgcagcttgtgcacaagttgatagcgatgac
aatgatgaggatgatgatgatgacagtgatgatgacgatgaatggggtcctacgtcacat
gggaaaaagaacgtccgggctcctcctgtacacactccaccaccagctgcagccccccaa
cgatcccgcagaaagcttcagccaccacagcacatccctccccagcctcaaccagtccac
cagccacctctgcagctccgtcaacctactcctcccccatctccacccccagagctgtct
ttcccgctacctgacactcccaaacaaagcccacatgaccaagatgaggcagcaggccta
gcagaaggtgctgctccaggggcagacgtggtctctcctccttcccttaaaagacaggag
tccagctccagttctagatccagcagcccagaacccccatccacacgcagacctggtcca
cttagcctgctggtccgcaaaatggaatcggagggcgtgtttgatggtacacagaaggca
gggatggagggagaaggagagatggaagttgaagagcaggaggatggtgaagcagaagtg
caagactcagctcagcagcttctcgggtcagaggcgtctgtgtcagtacctactgctaaa
cacgatgctgaagactctgagttgaaggaggagagagatgagcaaaaaaaaagtgaggaa
aaagaatatgagaacgtggatgagatttctgcaccattccatttgacatcacccaccact
ttcccaactagaaggccgcacattttctcagcggtcccaccacctgattcacttacatca
tcctccaaacctgagcaggtgtcagtgctcacatcagagccgaagtgctctgaagatgtt
gctatggaggcagaggcctctacaacgacacctgaatcaaaacacgaggaagggaaagaa
gtgaaagttctagagaaagagccacctgaacagtcacctaaaccagcagaagagagtgaa
aagtctttaaaatcagcacactctacatctgaagaaggagaaatggagaaaacaagagac
cattcacggagagagaaaggtcataaacgacgctcgtcaacgccaagtcagtcatcatca
tctgacaccgattcagaatcatcatcttctcattcttcaagctctccttcacaggataaa
tccagcgcacccagcaaaaagaaggatgaggaagaaaacagaagagatgatgttaaagaa
gaaaaaaaggctcagtcttcaagggatgtaaagcaggaagctctctctgagcctgcaggc
caagttgccatggaactggagggccggtctcattcagagagtgctatgcaacagcctgac
caccagggggcagattccagcgacnaccgcccagaggagagctccactgtaaaatcgttt
gctgcccgcaagatctccctgagcagtaaaacggagattacgtcatctgaggcagagcct
gtgggtggagctagcagaaaaagaaggtggggttctagtacagcagtcactgccaagaag
ccgtcaatcagcatcaccgctgaatcgctgaagacattaattccagacatcaagccccta
caggaggcggtggtcgagctgcacccagatgaggggcgtctctctggggatgaggactca
tctgagcctcgtgagcgagaggaaccggaggaggatcagggtcttaagatcagacgcaca
gtgacacaggtgattccatctgatggacacgagaatgggcagaaagaaataaaggaagag
gaggaggatgatgaagagcagaagtggactaaaggagagacagaaaaaaacaaaggaaca
ggagagaactcccctgatgttacaatggaaatacaggaggccgagcccaaaaaagtcact
cccaatgattctttggtgcgacgctccatcagtcagcagaaatcaggtgtgtccgtaact
attgatgaccctatacggacaggtcgccagctctctcctcctcgtggannaacctccaac
atcatacacgtctgcaacctggtgcgacctttcaccttagggcagctgaaggagttgtta
aatcggacgggtacattggtggaggagggtttctggatcgacaagatcaaatctcactgc
tatgtcacatactccactatagaggaagctgtggccactcgagaagcactgcatggtgtg
aaatggcccacaagtaatcccaaagtactacgtgtggatttttgcgagcaggatgagttg
gacttccataaaggtctcgtgtccagtgagcgtgcaggtgaaggtcaagaccctcacgcc
tcagcaacctcagcccgccctgccgcccatcacccactgccacctgcaaaccacgaaaaa
gagaaggaacgagaaagagagcgagatggaggagctgcagccgtgagagaccagtgggca
gagagggaaagagcgatggagagaagagagaggactcgttctgagcgggagtgggaccgg
gataaagtcaaggacttcgggaaggaggaccgagacagaacgaggaggtcacgatcacgg
gaccaaagacgcagagagagaggcaagagcaaagagaagagaacggagaagaaagataaa
ccagaagagcctcctgtaaaacttcttgatgacctgtttcacaaaactaaagcagctccc
tgtatatactggttacccctcacagaagaacaggcgacacaaagagctctggagcgtgct
gagcgcataaaggagcgagagaagaggaggaaggaactccaggaggaagaggacaaaaaa
caagaagaacggagagagcgagcaaaaggccgtgacagagagggagggaacgcaggagga
gcaggtgttgtgagacgttcaactgagggagagcgagacagggggaaggaaagagagaga
gaggggggcagagaggcagaaaagaggagagatgtccacagaggccgcggtagcgactcc
aaaactgcagggggcagcagaagctcacagagccgtagcatctcctccagagacagacga
cactga
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