Cyprinus carpio (common carp): 109064708
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Entry
109064708 CDS
T05134
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109064708 (vps50)
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Others
EARP complex
109064708 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
109064708
NCBI-ProteinID:
XP_042632898
Ensembl:
ENSCCRG00000027124
UniProt:
A0A8C2IDV2
LinkDB
All DBs
Position
A19:20928714..21053261
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AA seq
990 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESVVDTSPVESFRTPSKEELRELREQPTDPQAQQEIIDSIEEV
YFSSDSFDMVQYELEKLPPDLNLLELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLHSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMPYKDLCTHITTDSYIPCLTDLCKALWEVMLSYHLTMQWHDEHYKEEETTPGAD
DSSTEGSDESTVGRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDVSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
IAQLHEFRFMGQCRSPSVSPSRQPESTELVELCLFEQYLQGGNPFEMQIDNKEEETEDVL
ASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETLRSRKRSDYNL
NRANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDM
HFQSASLPSQGSQPGVSRQAVPVYWYESSGLGLISSRLRTTLSRIQESLIDMEAGGENAG
PHASPEERKEKVPSPHLSQLVILTSSDTLYGLAERVVATESLVFLAEQFEFLQPHLDTTM
PSAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNV
YVDVLLKEFEKFNQRLGDVSRIVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGR
ALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLTN
LVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctttgatggcccgtcagggtctgaagagtccccaggagagtgtg
gttgacacgagccctgtggagagcttcaggacccccagcaaggaggaactgagggaactg
agagaacaacccacggatccacaggcacaacaggaaatcattgatagcatagaggaagtg
tacttttccagtgactcctttgacatggtgcaatatgagcttgagaaactcccaccggat
ttgaaccttctggagcttgaggagtacagagataagctgaagagacaacaagcagccgta
tctaaaagagtggcagacctcattttggagaaacagccttcctatgttaaggagctcgag
agagtgacttctctacagaccaacttacagcttgctgcagtcatctgcactaatgcacga
aggcagcttcattctgctaaagaaggcttcactgaagccagtctggggctgttagccaat
cagagacgacgacagctgttgacaggattgttgaagtctttgaggaccataaagactctg
caaagaactgatgttcgactgagtgaaatgctggaggaggaggactatccaggcgccatc
cagctttgtttagaatgccagaaggctgccagcactttcaaacactacaactgtataagt
gagttgaattccaaactgcaagacactctggagcaaatcgaggaacagctagatgtggca
ctgtccaaaacctgcaaacactttgatgtttctcactacaccaaagttcagctggcatat
aagctgctggggaagacacagacggccatggatcagctgcacatgcacttcacccaggcc
attcacaacactgtcttccaggtggtgctgggatacgtagagctgtgtgcaggcaacgcc
gacaccaagttccagaagatgccatacaaggacctttgcacgcacattactacagacagc
tacatcccctgcttgactgatctctgcaaggccttgtgggaggtgatgctcagttaccac
ctaaccatgcagtggcacgatgagcactacaaagaagaagagacgactcctggagcagat
gattccagcacagagggctcagacgaatccactgtgggccgcagctatgtgaagaagaag
ctggaacatggcttaacgcggatctggcaggacgtccaattgaaagtgaaagcctatttg
ctgggaactgacgtgtccaacttcaagtacgacgacttcattgtggttctggatgttatc
agcaggttgatgcaggtgggagaggaattctgtggcagtaagtctgaggtgttgcaggag
tccatcaagagacagagtgtaaactactttaagaactatcacaggactcgcctggaggag
ttgcgaatgtttcttgaaaatgaaacatgggagctgtgccctgtgaagtccaacttcagt
atcgcccaacttcatgagtttaggttcatgggtcagtgtcgttctccttcagtatctccc
agcaggcagccggaatccacagagctggtggagctttgtctgtttgagcagtacctgcag
ggtggaaatccttttgagatgcagatagacaataaggaagaggagactgaggatgtcctg
gcttctaatgggtatgagtcagatgagctggagaagagcgtgtatcaggactacgacagt
gacagtgatgtacctgaggagctgaaacaagactatgtagatgaacagacaggagacgct
ccagtgaagagcgtgtccagagagacacttcgcagccggaagaggtccgactacaatctg
aaccgagccaatgcccccatccttaccaacaccaccctcaacgtgattcgcctggttgga
aaatacatgcagatgatgaacattctgaagcccatcgcctttgatgtcatccactgcgtg
tctcagctctttgattattacttgtatgccgtctacaccttctttggccgcaatgacatg
cacttccaatctgcatctctgccttcacaaggctctcaacctggtgtgtccagacaggcg
gtccctgtctattggtatgaatcatctgggctgggtttgataagcagcagactgaggact
acgctcagccgaatccaggagagcctaatagacatggaggctggaggggagaacgcaggt
cctcatgcatctcccgaggaaaggaaggagaaggtccccagtcctcatctgagtcagctg
gtgatcctgacgtctagtgatacgctctatggcttggctgagagagtcgtcgccactgaa
tcactagtttttctggccgagcagtttgagtttcttcagcctcatcttgacaccacgatg
ccttcagccaagaagcccttccttcagcagttctactcacagactgtatctacagccagc
gagctccgcaaacccatttactggatcgtggcggccaaagccatcgattacgaacagatg
ctgttactgatggcgggagtgaaatgggacattaaagagataatgtcacagcacaacgtc
tatgtggatgtccttttaaaggagtttgagaagtttaaccagagactgggagatgtgtca
agaatagttcggattcctctgcctgtgtccaatgtcttatgggagcactgcatccgtctg
gccaacaggacattagtggagggctatgcaaatgtgaagaaatgcagtaatgaaggacgt
gcactgatgcagctggacttccagcagttcctgatgaagctggagaagctcaccgacctc
agaccaattccagacaaggagttcgtagagacctacatcaaagcatactaccttactgag
aacgacatggagcagttcatcaagaaccacagggagtactctatgaagcagctgaccaac
ctggtcaacgtctgcctcgggtcccacatcaacaagaaagcgcgacagaaactcctcgca
gctatcgatgacattgaccgtccgaaaagataa
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integrated database retrieval system
