Cyprinus carpio (common carp): 109064744
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Entry
109064744 CDS
T05134
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109064744 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109064744 (herc4)
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109064744 (herc4)
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
HECT type E3
109064744 (herc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
109064744
NCBI-ProteinID:
XP_042593537
Ensembl:
ENSCCRG00000044772
UniProt:
A0A9Q9X1K1
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All DBs
Position
B13:complement(29730172..29749170)
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AA seq
1059 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVLEPRKCEFLEGKRVRDVGCGRRHSVFLLEDGTVYTCGC
NDLGQLGHDKARKKPEQVMSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSN
IEDRIRIPRTVKSLSEVHIAQVACGNCHSLALARGGQIFSWGQNKYGQLGLGMQGAGVSS
PQVVQSLQGVPFAQISAGGAHSFGLTLSGAVFGWGRNKFGQLGLSDNDDRCFPALLKTLR
SQRVVYISCGEDHTAVLTKEGGVFTFGAGGYGQLGHNTTNNEVNPRKVFELMGSVVAQIA
CGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPAPVKGCWRAHTDPVPVDVEAEQ
SFCVKRIYAGGDQSFAHYALPQDDSPPVDRRITRPDGQIYTLSDDLIQKWLNHGHGRLSP
EITNEIDLVFSSASCLNGSFLSGSNPDHYSTNSKCSGVDINTARLLYHRLIQPDYPQISQ
IVAASLEKNLLPRLSSSPPDIEALRLYLTLPECPLLSNPNNYTTLTIPFAKAVVSLKDAP
LRVLGNWWSKFEPAVFQRLVELYKEVVVYLLRMQKLGIPLSEQRIFTCFLHTSLKFLEIL
HSVNERAGQIIQYDKFYIHELDELIDIRNDYVTWFQQQMFSVVSFLHCPKVMDSQVTMCK
YPFVFDAQAKTALLQTDAVIQMQMAVDQAQRQNLHSLFVPGGGVESVNPCLILIVRRENV
VGDSMEVLRKSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMKELLDPKYGMFRYYEE
SRLIWFAHKTFEDIDLFHLIGVVCGLAIYNLTIVELNFPLALYKKLLKKTPTLEDLKELM
PDVGRSLQQLLDYTEDDLEEAFCLNFTIIEESFGTTEVLELVPNGTDISVNKSNRQEFVN
AYVDYIFNTSVAPQFSAFYAGFHKVCGGKVLELFQPSELQAMVIGNTNYDWKELEKSTEY
KGEYWADHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLALVIQPTGGGEDY
FPVAHTCFNLLDLPKYTNKETLKEKLLHAIEHTQGFNLV
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctgggggaacgcctcgtacggacagctgggtttgggtgggattgatgaggag
atagtgctggagccgaggaaatgcgagttcttggagggcaagcgtgtgcgggatgtggga
tgcggcagacgtcacagtgtctttctgctggaggacgggacggtgtacacctgcggctgc
aatgacctgggacagctggggcatgacaaagcacgcaagaaaccagaacaggtcatgtct
ctggatgctcagaacattgtggccgtgtcttgcggtgaagctcatactctggctctgaat
gataaaggacaagtgtttgcatggggtctgggctcagacgggcagctcggcctttcaaac
atcgaagatcgtatccgtatacccagaactgtcaagagtttatcagaggtccacattgcc
caggtggcctgtggaaactgccattcccttgctttagccagaggaggtcagatattctcc
tggggccaaaataaatatggacagctggggctgggaatgcagggagccggcgtctcctcc
ccacaagtcgttcagtctttgcagggcgtcccatttgcccagatatctgcagggggcgct
cacagcttcgggctcacgctgtctggggccgttttcggctgggggcgaaacaagtttggc
cagctgggcctcagtgacaatgatgatcgctgtttccctgccttgctgaagactctcagg
tcccaaagggtcgtctacataagctgtggagaggaccacacggctgtactaacaaaggag
ggaggtgtgtttacatttggagctggaggttacggtcagctgggacacaacaccacaaac
aatgaggtgaaccccaggaaggtgtttgagctcatgggaagtgtggttgcacagatagct
tgtggtaggcagcacactttggcgttcatcccttcatcgggaaagattgactcgtttggt
ctcggcggtaacggacagctaggaacccgctcgacctgcaataggataagtcccgcccct
gtgaagggctgctggcgagcacatactgatcctgtgcccgtggatgtagaggcggagcag
agtttctgtgtgaaaaggatttatgctggaggagaccagagcttcgctcactacgcttta
cctcaggacgacagccccccagttgaccggaggataaccagacctgatggacagatatac
acgctcagtgatgacctcatccaaaaatggctcaatcacggccatgggagactatcacca
gaaatcaccaatgagattgatcttgtgttctcttcagcaagttgtctcaatggaagcttt
ctttctggaagtaatccagatcactacagcactaacagtaagtgctcaggtgtagacatt
aacacggctcgcctgctctaccacagactcatccagcccgattacccacaaatctcacaa
attgtagctgctagtttggagaagaatctcctccccagattgagcagttctcctccagac
attgaggctttgagactgtacctcacgctgcccgagtgtccgctcctcagcaaccccaac
aactacacaaccctcacgattcccttcgccaaggctgtcgtgagcctgaaggacgccccc
ctcagagtgctcggaaactggtggtcaaagtttgagccagcggtcttccagaggctggtg
gagctctataaagaggtggtggtgtatctcctgcggatgcagaagctgggaattcctctt
tctgaacagaggatcttcacctgcttcctgcacacctcactcaagttcctggagatcctc
cactcggttaatgagcgtgctggccagatcatccagtatgacaagttttatattcatgag
ctggatgagctcattgacatcaggaatgattatgtcacctggtttcagcagcagatgttc
tctgtggtgagttttctgcattgtccaaaggtcatggactctcaggtgaccatgtgcaaa
tacccatttgtttttgatgctcaggcgaagacggcgctgcttcagactgatgctgtgatc
cagatgcagatggcggtggatcaggctcagagacagaacttacactctctgttcgtgccc
ggcggaggagtggagtcagtaaacccctgcctcatcctcatcgtacgccgagaaaacgtg
gtcggagactccatggaggtgctgaggaagtccaaaaacgtcgattacaagaagccactc
aaggtgatcttcgtgggagaggaggccgtagacgctggcggtgtgagaaaagagttcttc
ctgctcatcatgaaagaactcttggaccctaaatatgggatgttcagatactacgaggag
tccagactcatctggttcgctcacaagacatttgaagacatcgatctgttccatctgatc
ggtgtggtctgcggattggccatctataacctcactatagtggagctgaacttcccgcta
gcgctgtacaagaaactcctgaagaaaactcccaccctagaggacctgaaggagctcatg
cctgacgtaggaaggagtcttcagcagctgctggattacacggaggatgatctggaagag
gctttctgcctgaatttcacaatcatagaggaaagctttggcaccacagaggtattggag
ctggttcccaacgggacagacatcagcgtcaacaagtccaacaggcaggagttcgtcaat
gcctacgtcgattatatattcaacacctccgtggctcctcagttcagcgctttctacgcg
ggatttcacaaagtgtgtggagggaaagttctagagcttttccagcccagtgaactgcag
gccatggtcataggaaacaccaattatgactggaaggagctagagaagagcacagagtat
aagggcgagtactgggcggatcaccccaccatcaagatattctgggaagtgtttcacgag
ctgcctttggagaagaagaaacagttcctgctgttcctcacgggcagcgaccgaatcccc
atccttggcatgaagagcctggcgttagtgatccagcccaccggtggcggagaggactat
ttccctgtagcgcacacatgcttcaacctgctggatctgcccaagtacactaataaggag
acactcaaagagaaactgctgcatgccatcgaacacacccagggcttcaacctcgtctga
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