Cyprinus carpio (common carp): 109065330
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Entry
109065330 CDS
T05134
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109065330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109065330
Enzymes [BR:
ccar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109065330
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109065330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
109065330
NCBI-ProteinID:
XP_042603777
UniProt:
A0A8C1JKA5
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All DBs
Position
A4:3918366..3921628
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AA seq
310 aa
AA seq
DB search
MPKRAKKNEEAVDGETGNGAEPAKKEKKGKEPEAPILYEDPPDKMTSKDGRAANMKITSW
NVDGLRAWVKKNGLDWVRKEDPDVLCLQETKCAEKALPSEITNMPEYPHKYWAGSEDKEG
YSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPSFFLVTAYVPNASRGLVRLDYRKT
WDVDFRAYLSDLDKRKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTELLKAG
FTDSFRELYPEQANAYTFWTYMMNARGKNVGWRLDYFLLSSALLPGLCDSKIRNTAMGSD
HCPITLHLAM
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagagccaagaagaatgaggaagctgtggatggggagactggcaatggagct
gaacctgcaaagaaagagaaaaaggggaaggagccagaggctccaattctgtacgaagat
cctcctgataagatgaccagtaaggacggccgtgcggccaacatgaagatcacctcgtgg
aatgtggacggtctgcgtgcatgggtcaaaaagaatggccttgattgggtgcgtaaggag
gatccagacgtgctttgtctgcaagaaacaaagtgtgctgagaaagccctgccatctgag
atcacgaacatgcctgagtatccgcacaagtactgggctggatcagaggataaggaaggt
tacagcggagtggccatgctctgcaagaccgaaccgctcaatgtcacctacggtattggt
aaagaggaacatgataaagagggccgagttatcactgctgagtttccgtctttcttcctg
gtcacggcatatgtgcccaatgccagccgtggtttggtgcgtctcgactaccgcaagacc
tgggacgtggatttccgtgcctacctgagcgacttggacaagcgcaagcccctggtgcta
tgtggagatctgaatgtggcccaccaagagattgatctcaaaaaccccaagggtaaccgc
aagaacgcaggcttcacccccgaggaacgtgagggcttcaccgaacttctcaaggccggt
tttaccgacagttttcgggagctgtatccagaacaagccaatgcctacaccttctggacc
tacatgatgaatgcacgaggcaaaaacgtcggctggcgtttggactactttttgctgtcg
tctgccttactcccaggtctgtgtgacagcaagatccgaaatacggccatgggaagtgac
cactgtcctattaccctgcatttggccatgtag
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