Cyprinus carpio (common carp): 109065611
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Entry
109065611 CDS
T05134
Symbol
alms1
Name
(RefSeq) uncharacterized protein alms1 isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109065611 (alms1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109065611 (alms1)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
109065611 (alms1)
Cilium and associated proteins [BR:
ccar03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109065611 (alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
109065611
NCBI-ProteinID:
XP_042592495
UniProt:
A0A9R0AC00
LinkDB
All DBs
Position
B13:complement(11966255..11981995)
Genome browser
AA seq
2184 aa
AA seq
DB search
MRVNVCVSNDMDSEGCAANVNNAVPTWRTMEPPAEIPCQQHGQNMHDSEASRPYTDPDNE
ERPFSNTQDSSVQPLIDRSETLQLDFQDSQLSPALTLHPCLDKSHLLSDSTFFQHTDAEF
VPLRGCPDFSVMTERCPRTSNVAVTDDSHHQNTILYQAGLSQHPLEVPTALSGEKSCCSL
SQHSLSPGDYCKGLEDQGSVSYGAEDKIIRHMEGEEQTTAQQLIEGMSARLLLESREEDV
IVAVSDSSAISSTSEPVSLHQNIDKSQLDPSMNLQKGREQPQGGSLSSFQKAADVSNITF
RDSRMHSHQTTDHLHDQLLSARQRGSISAPASRHHSGNKSSHSGMCVTPAGEGLMHVPDL
QRVLWSSGHLTAADGSFLSSQPVSQSTPALPLMRPPPALTKLSLIDSTQEAVASAATSSQ
NSLSKTGLIPSLDLSGQRSSPIHSQTTATVPSGPSETVQTVSNAHPISNEQINPPASNTP
HSDTQHFYSGAEMKDQVPRLALGRVHSLPSLNYLQKVDAWKANQNSSRSFYENLAPPGFD
GVSPKKKAQDVVSEALNHMLSRDTRLTFGANPSSQMIQPLSSSHSGSGSPRRVDVVGAGA
CRGQASESPVNRSHSHSSLSSVVTSIQKDAGPHNQHIPVTQFNNIIPATRSFDYQSSFVS
DGKGEGKNSSAPHADKSSVKMSPLLSLGRFSDMSSNLNMSSTLSSSQGSCHGEQSMRASV
GAASSVVSLEVDNYAPYWTSRPASPPHTRELNIEDRIPLYLLNLGIDQSPSTILNPFTRR
GPIREPEFSPTDLCTIKGSIGTPTKSTQPSEVDSLQKETFSSSSQLSADSCASVTHRLSV
HEQGQPASDGTVKKMFNQVDTPPRINSTVHPLSSLQQSDAPQSEGSFGLPSQISSESMPP
PGPREVVKEDDDSFVGSGTLREIRRLLGQAESLVSGRSSLTSSPGSHRLSESDTSLVSLG
RNIQGYHEDTSLSAGGNLSLLLTRSSSDSALKGSLSSSQRLQQIDRTTIEPTALSLSREE
SLKSRDLCVTPRRAEPEGCSAPDQDKAKPPTVTSAMQINVPSIAENQDQTEDAVIGSSEN
NSSHGSAEVESMSDSNSESSLAVRVARLLQSESPVSMVTSRPSSSDPEDSRAREWILMKV
SGRRCESLELNAEDRERIEDIKRELLLNTKYTKWSSDSEGSAQSSVGPESQLTKDCVGLR
NMENRNLDQLQKVDSKPLDTVPFYTPIQQDLEAKVRQIALREGLSSQLFTSVTISTTRHT
PSPQSPSHCPITATEELDSVGPDHETLESTSQMRLQPAVIPNVSGREKEMAREEQHREEK
KGEEMSDDNKENIVTNTPQSIHRIPHMDYNVTGSNQILSSAASDSAFDKKSHLSHIHVTL
SPKPKHQSNPNYLSRLSSQNTSKDVPPPVVSGMTGEHLQSIHQISNSNHARSYEHREPVQ
GQNAGSISAHLQARYPQTFAPSQRLAGTSRTLSVQAAVPALLPYKPHGSSELFYIPQADP
ELSPGHSDTTVESSHPGSDDAVPPHFNTDILGSRELEDNIITSKHKEGIYSKRANMKRVS
SVSGQNYNTVPEAYVFEKSVDTVGIDKEYRDEEENFVPLHMEADYSTDDVHLHTSTIQEP
KLPLEPRHLPSQPIRKSYREDKKKQDRTPHDVSIEISGSLDQLWRRFSEKWSMEETRPTN
EGETSLLDRLERLSRLIHSTTPTDLTTQQSHSRRGEYYRRTDREDGTTEGEEQGERVQLD
MAPQQAWPEHEESQDRVHRCPAERDESASVETSSSLSTIDTERLLRAFGPHRVTSKGLKS
SDSLLRLYNTLNMQKTGRRKSRTKHVAISVATDDVSTDDSTVSADSLSSSSTLSHRSQRG
VSQNLNSKRSKVKLVSKGVQAGDLEIVINGTRRHTRDVGTIFPSPCAFKNIRSSNTFGRS
IQSGFPIPTASTSKPTQTLTAPKKDPSNKSSRTRYPNGVSWFVAADDLKCDGRKENQPQT
ESEPCPSQVWFEPYTRTRPWRETTREPLRERQNQQEQERPTESITATERDISDKPSALIR
LSLQEALELHRPEFVSRSRERMKRLGLLVEERRLQAVFNREREELFNCPAPSRPYRPAAP
VPRKRVVPRREMVQRSKDWVGRKSHSQRIDRTDRLRRKYAQLPEVQRRREEERRQAEYRS
YRHNAQLFNKKVTNRVLGRRAPWQ
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttaacgtctgcgtcagtaacgacatggattcagaggggtgtgcagcaaacgta
aacaatgctgtgcctacatggaggaccatggaaccccctgcagagattccctgccagcag
catggacaaaatatgcatgattcagaggctagcagaccatacacagatcctgacaatgaa
gaaagaccatttagtaacactcaggattcaagcgtgcagccactcatagacagatctgag
actttacaactggactttcaggatagccagttgtcacctgcacttaccctgcatccatgc
ctggacaaatctcaccttctttctgactccacattttttcagcatacagatgcagaattt
gtccctcttcggggatgtcctgacttctcagttatgactgagagatgccccaggacttca
aatgtagctgtaactgatgattcccaccaccaaaatactattctttaccaggctggactt
tcccagcatccgttggaggtaccaacagccctgtctggtgaaaaaagctgctgttcactc
tcccagcacagcctgtctcctggagactattgcaaagggcttgaggatcaagggagcgtt
tcttatggtgctgaggacaaaatcatcagacatatggaaggagaggagcagaccactgct
cagcagcttattgagggaatgtctgctcggctcttgttagagtccagggaagaggatgtt
attgtggctgttagtgacagcagtgccatttcctccacctctgaacctgtctcacttcac
caaaacatagacaaaagccagttagatccttccatgaatcttcaaaaaggcagagagcag
ccccaagggggctcattatcatcatttcagaaggccgcagatgtttcaaatataactttt
cgtgattcacggatgcattcacaccagacaactgaccatctccatgatcagcttctgtct
gcaagacaaagaggctccatctcggcaccagcaagtaggcaccatagtgggaacaaaagc
tctcatagtggaatgtgtgtcacaccagctggtgaaggtttgatgcatgtaccagatctg
cagagagtgctctggagctccggtcatctaacagcggcagatggttcattcttgagctct
cagcctgtgtctcagtccacacctgcactacctctcatgagacccccaccagcattgacc
aaactctcactcatagactccacacaagaggctgttgcttctgcggctacatcctcccaa
aacagtctctccaaaactggcttaattccatcattggacctaagcggtcagcgttcctct
cccattcactctcaaacaacagctacagttcctagtggaccttcagagactgtgcaaaca
gtgtcaaatgcccatcccatttcaaacgaacaaataaatccacccgcctctaatacacct
cactctgacactcagcacttttactctggtgcggagatgaaagatcaggttcctcgtttg
gcccttgggagagtacattctcttcccagtctaaactacttacagaaagtagatgcctgg
aaagccaatcaaaattctagcaggtcgttttatgaaaatttggcaccaccggggtttgat
ggtgtgtcacccaagaaaaaagcacaggatgttgtttctgaagcacttaaccacatgctt
tctcgagacacgcgtctgacatttggtgctaatcccagctcccagatgattcagccactt
tcctcttctcattctggtagtggctcaccccgtcgggtggatgttgttggggcgggtgcg
tgcagaggacaagcatctgagtcacctgtcaatcgctcacactctcactcctccctgagc
tctgtggtgacctctattcagaaagacgctggtccacacaatcagcatattccagtaaca
caatttaataacatcattccagctaccagatcatttgactatcagtcgtccttcgtttca
gatggaaagggtgaaggaaagaatagttcagctcctcacgcggataaaagctcagtcaag
atgtctcctctcctcagtctggggcgcttcagtgacatgtcatcaaatctcaacatgagc
agcactctctcaagctctcaaggcagctgccatggtgagcagagtatgcgggcatcagtg
ggagccgcctcttcagtagtgagtcttgaagtagataattatgcaccctactggacctcc
agacctgcgtcccctcctcacactagggaactcaacattgaagacaggatcccgctgtac
cttttaaatttgggtattgaccagtcaccttcaacaatcttaaatccatttactcgtcga
ggaccaatcagagagcctgaattctctcctactgacttatgtaccatcaaaggctccata
ggaacaccaactaaaagcacacagccatctgaagttgacagtcttcagaaggagacattc
tccagttctagtcagctctcagctgactcctgtgcttctgtcacacaccgattgtcagtg
catgagcaaggccaaccagccagtgatggaactgtgaagaaaatgttcaaccaggtggat
acgccaccaagaataaattcaactgtccatcctttatcaagcctacagcagtctgatgct
ccacaaagtgaaggaagctttggccttcctagccaaatcagctcagaatccatgcctcct
ccaggtcccagagaggtggtaaaggaggatgatgactcttttgtaggctctggcacactg
cgtgaaatcagacgtctgctgggccaggcagaaagtctggtttctggtcgatcctctctg
acttcctctcccggctcacaccgcctctcagagagtgacacatcccttgtttcattagga
cggaacattcaaggttatcatgaagacacatctctgtcagctggcgggaatctttcattg
ctgctgactcgctcttcatcagattcggctttgaaaggaagcttgtcatcctcccaaagg
cttcaacagattgaccgcacaactatagagcctaccgctctctctttgagcagagaggaa
agtttgaagtcacgtgacctctgtgtgaccccaaggcgggctgaacctgaaggctgcagt
gctccagaccaagataaggcaaagccacctacagtcacatctgccatgcagataaatgtt
ccttcgatagcagaaaaccaggaccagactgaggatgctgtgattggctcttctgagaat
aattcatctcatggctcagctgaggttgaaagtatgagtgacagtaacagtgagagttca
ttggctgtcagagttgccaggctcctgcagagtgagtcacccgtttcaatggttacaagc
cggccaagcagcagtgatccagaagatagccgtgcgcgagaatggatcctgatgaaggtt
tctggccgcagatgtgaaagcttagaactaaacgctgaggacagagagagaattgaagac
atcaaaagagagctgctactgaacaccaaatacaccaagtggagctcagattctgagggc
agtgcccaatcgagtgttggtcctgaatctcagctgacgaaggactgtgttggactgcgt
aacatggagaatcgtaacttagatcagctgcagaaagtcgattcaaaacctttggacaca
gtcccattttacactcctatccaacaggatctagaggccaaagttcgccagattgccctt
agagaggggctcagttcccagctgtttacttctgttactatatcaaccactcgccacact
ccgtctccacagtcaccatcacattgccctatcactgctactgaggaactggacagtgtt
ggtcctgaccatgagactttagagagcacgagccaaatgagacttcagccagctgttata
cctaatgtatctggcagagaaaaggagatggcgagagaagaacaacacagagaagagaag
aaaggagaagaaatgtctgatgacaacaaagagaacattgttacaaacactccccagagt
atccatagaatacctcacatggactataatgtcactggcagtaaccagatattatctagt
gctgcatcggattcagcctttgacaagaagtcccatctctctcacatacacgtcacctta
tcacccaaacccaaacaccagtccaatccaaactacttaagcagactatccagtcaaaac
accagtaaagatgtcccacctccagtggtgtcaggcatgactggtgaacatctgcagtcc
atacaccaaatctcaaattcaaatcatgccagatcatatgaacacagagagccggttcaa
ggccagaatgcaggaagcatcagtgcacacttacaggccagatacccacaaacctttgct
ccctctcagaggctggccgggacatccagaactctctctgttcaagcagctgtccctgcc
ctgttgccgtacaaacctcatggaagctccgagcttttctacatcccgcaagctgatcca
gagctttctcctggtcactcggacacaactgtagaaagctctcacccaggttctgatgat
gctgtccctccacactttaatacagacattttaggctctagagagctagaagacaacata
attacatcaaaacacaaggaaggcatctacagcaagagggccaatatgaagagagtttcc
agtgtgtctggccaaaattacaatactgttcctgaagcttatgtttttgagaagagcgtg
gacactgttggcatagataaggagtatagagatgaggaagaaaattttgttcccttacac
atggaggcagactacagtacagatgacgtgcatcttcacactagcaccattcaggagccc
aaattaccgctagaaccacgccatttaccttctcagccaatcagaaagtcctacagggag
gacaagaaaaagcaggacagaacacctcatgatgttagcatagagattagcggttctctg
gaccagctgtggcgtcgcttcagtgaaaaatggagcatggaggagacaaggccaactaat
gagggagagacgtcactgcttgatagactggagcgtctgtctcgtctcattcacagtacc
actccaacagacctaactacacaacagtcacacagcaggagaggagagtattacaggagg
actgatcgagaggatgggaccacagagggagaagagcaaggagaaagagttcagttagac
atggctccacaacaagcttggcctgagcatgaggagagtcaggacagagtgcatcgctgt
cctgctgagagagatgagtctgcgagtgtggagacgagcagtagcctgtccactattgac
acggagcggctgctgcgagcttttggacctcaccgggtcaccagtaagggactgaaaagc
agtgacagcttgctcaggctttacaacaccctcaatatgcagaaaactggccgaaggaaa
tcccgaactaaacacgttgccatctctgttgctaccgatgatgtgagcactgatgactcc
acagtctctgctgattctttatcatcttcaagcactttatcccatcgttctcaaagaggt
gtttcccaaaacctcaattccaaaaggtcaaaggtcaaactagtcagcaaaggtgtgcag
gcaggtgatttggaaattgttataaatggcacccgcagacacactcgggacgtaggcacc
atctttccctcaccatgtgctttcaaaaatatccgttcatcaaacacattcggcagaagc
attcagagtggctttcccatccccactgcttccacatctaaacccacccaaaccctgact
gccccgaagaaagaccctagcaacaagagcagccggacacgctacccaaacggtgtgtca
tggttcgtcgcagctgatgatcttaagtgtgatggtcgcaaggaaaaccagccacagacc
gaatcagaaccttgcccaagccaagtctggtttgagccgtacactagaaccagaccctgg
agagaaacgaccagagaaccactaagagagagacagaaccagcaagaacaagagaggcca
acagagtccataacagctacagagagagatatcagtgacaaaccctcggctcttattcga
ctttcactacaggaagctctggagctccatcggccagagtttgtatctcgttcacgggag
cggatgaagcgtctggggttgctggttgaggagaggaggttacaggcagtcttcaacaga
gagagagaagagctcttcaactgccccgcaccatcacgtccatacagaccagcagctcca
gtaccccgtaaacgagtcgttccaagaagagagatggtccagagatccaaagattgggta
gggaggaaatcacacagtcagagaatagacaggacagacagactcaggaggaaatatgct
caacttcctgaggtccagagaagaagggaagaggaaaggagacaggcagagtaccgctcc
taccgccacaatgctcaactctttaacaagaaagtcactaatcgtgtgctgggaaggaga
gcaccctggcagtga
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