Cyprinus carpio (common carp): 109065637
Help
Entry
109065637 CDS
T05134
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04115
p53 signaling pathway
ccar04120
Ubiquitin mediated proteolysis
ccar04137
Mitophagy - animal
ccar04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109065637
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109065637
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109065637
09143 Cell growth and death
04115 p53 signaling pathway
109065637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109065637
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109065637
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
109065637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
109065637
NCBI-ProteinID:
XP_042630665
UniProt:
A0A9Q9Z3F1
LinkDB
All DBs
Position
A18:complement(1042629..1061361)
Genome browser
AA seq
336 aa
AA seq
DB search
MSASIRLQPVYSWKGVLKLFSCIAARTTSKPKEVHTFQGKKKDVLGNHMDEEMSRQTATA
LPTGTSKCPPSQRVSGALSGTTASNSDLASLFECPVCFDYVLPPILQCQSGGHLVCSNCR
PKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPY
SCPCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG
FHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEG
IATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctctattagactacagcctgtgtactcatggaagggagtgctcaagctcttc
tcttgcatagcggccagaacgactagtaaacctaaagaggtccacacatttcaaggaaag
aagaaagacgtacttggaaatcatatggacgaagaaatgagtcgccagactgccacagcg
ctgcccacaggtacctctaagtgtcccccttctcagcgtgtctcaggtgccttgtcgggc
accaccgcatccaacagtgacctcgccagtctgttcgagtgcccggtctgttttgactat
gtgctgccgcccatcctgcagtgccagagcggcggccatttggtttgtagcaactgccgg
cccaaactcacctgctgccctacctgcagaggcccgcttggttcaatacgcaatttggca
atggagaaagtggccaactcagtgcttttcccttgcaagtatgcctcatcgggctgtgaa
gtcaccctaccgcacaccgacaaggctgaacatgaggagctttgtgaattccggccatac
tcttgcccctgtcctggcgcctcctgcaagtggcagggatctctcgacgccgtcatgccc
cacttgctgcaccagcacaagtccataaccacgctacaaggtgaggatattgtcttcctg
gccacagatatcaacttgcctggggcggtggactgggtcatgatgcagtcatgcttcggc
ttccattttatgcttgtgctagagaagcaggaaaaatatgatggccaccagcagttcttt
gctatcgtgcagctgatcggcacacggaaacaggcagaaaactttgcctaccggctggag
ttgaatggccaccggcggcgcctcacctgggaggccacgccacgttccatccatgagggc
attgccaccgccatcatgaatagtgactgccttgtgtttgacacctctattgctcagctg
tttgcagagaacggcaacctgggcatcaacgtcaccatatccatgtgctga
DBGET
integrated database retrieval system
