Cyprinus carpio (common carp): 109065663
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Entry
109065663 CDS
T05134
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109065663 (apex2)
Enzymes [BR:
ccar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109065663 (apex2)
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109065663 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
DUF6481
Motif
Other DBs
NCBI-GeneID:
109065663
NCBI-ProteinID:
XP_018938196
Ensembl:
ENSCCRG00000052142
UniProt:
A0A8C1TS56
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Position
B8:complement(11156469..11161877)
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AA seq
563 aa
AA seq
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MKIVTWNINGIRTFKNGIKKILDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPFLAEEGLTGLLANQGEAVGCYGDQVELSSEELLALDNEGRAV
ITQHHFVGKDGPQKLTVINVYCPRADPDKPERKQYKLQFYQLLQCRAEAILSSGSHVIVL
GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDHFLFGMAEKTENDNTEDDLTDISQKSASG
GKFVDSFRHFHPMRSSAFTCWSTITGARQTNYGTRIDYIFADHCLVKSAFIGVDIMPEVE
GSDHCPVWAQLSCTLQSSPKCPPLCTRHMPEFTGRQQKLSRFFVKVSDKERVSKVSEESL
PGSQESGEIRENLNPVVQGNSVAKKRPTCREKDANASKAKRSNQMKTESNAKGSLLAFFK
PKQTPTIPSIVNLSPKQTKSSEDSQGSESDVRSCPSNVQTKTNISLVTEMETENQDEVEG
ESTSTVKSKDCKKGPCTGFWKAVLHGPPQPPLCKSHNEPCVLRTVKKAGPNLGRQFFVCA
RPQGHASNPQARCNFFAWVDKGK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtaacatggaatataaacggcatacgaacttttaaaaatggcatcaagaaa
atattggattcattcgatgccgatataatctgcgtccaagagactaaagttacccgtgac
ctgttggatgagaagacagcaattgttgatggctacaattcatactttagttttagccga
ggacgaagtggatactcgggcgtagcgacctactgtaaggatagcgctactccgttcctg
gctgaggaaggattgacaggtctgctggccaatcagggagaggctgttggttgctatggt
gaccaggttgagctgtctagtgaggagcttctggcgctggacaacgaaggaagggcagtc
atcactcagcatcacttcgttggcaaagatggaccacagaagctgaccgttattaatgtg
tattgtccccgagctgatccagacaaacctgagagaaaacaatacaaactccagttttac
cagctcctccaatgcagagctgaagccatcttgagctcagggagtcacgtgattgtattg
ggagatgttaacacttctcatcgacccatagaccactgtgacccagatgatgtggataac
tttgaagataatccagggaggaagtggctggatcattttctgtttggaatggccgaaaag
accgaaaatgacaatactgaagatgaccttacagacatctcccagaaatctgcctctggt
ggcaagtttgtcgactccttccgccatttccacccaatgcgctccagtgccttcacgtgc
tggtccacgattacgggtgccaggcagaccaactatggcacacggattgactacatcttc
gccgaccactgtctggtgaagtctgcctttattggcgtggacattatgccggaggtggag
ggatccgatcattgtcctgtatgggcgcagctcagctgtaccctccagtctagtcccaag
tgccctcccttgtgcacacgtcacatgccagagttcactggcagacagcagaaactctca
cgcttctttgtcaaagtttcagacaaagagagggtttctaaagtctctgaagagagtcta
cctggatcacaggaatctggggaaattcgggaaaacctgaatcctgtagtacagggaaac
agtgttgcaaagaagagacctacatgtagagaaaaagatgcaaatgcatccaaagccaaa
agaagcaatcagatgaaaactgaaagcaatgctaaaggaagtcttttagctttctttaag
cctaaacaaacaccaacgattccttccattgtaaacttgagcccgaaacagacaaaatcc
tctgaggatagccaaggtagtgagagtgatgtcagaagctgccctagcaatgtgcaaacg
aagaccaatatttctttggtaacagagatggagactgaaaatcaggatgaagtggaagga
gaatcgacatccacagtcaagtcaaaggactgtaaaaaggggccatgcactggtttttgg
aaagcggttttgcatgggcctcctcaaccaccactgtgtaaatctcacaatgagccctgt
gtcttacggactgtgaaaaaagcaggacctaatttaggccgccagtttttcgtatgcgct
cgtcctcaaggccatgcctccaatcctcaggccaggtgtaatttttttgcctgggtagat
aaagggaagtag
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