Cyprinus carpio (common carp): 109065786
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Entry
109065786 CDS
T05134
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109065786
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109065786
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
109065786
NCBI-ProteinID:
XP_042634092
Ensembl:
ENSCCRG00000047653
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All DBs
Position
A20
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AA seq
424 aa
AA seq
DB search
MSGSSGNGKLRQWLIEQVDSGKYPGLVWEDRERTVFRIPWKHAGKQDYNRDEDAALFKAW
ALFKGKYREGIDKPDPPTWKTRLRCALNKSSDFEELVGRSQLDVSEPFKVYRVIPEGTKR
APKSYEKVSTSLGHHNYPFYPPYEPVEGQVCNFLSAADRSWRDFLCEQNSLSDVHFSQNS
RWDTGYQISGSFYSCNTFDSPPSPFSLDASMRSAEAMALSDTRLQVTVFRGETPVADVTV
MSAEGCRLAPHDDNWTFSGPGGPELVPLPQVERGALEGGVLLWMTPDGLYARRFCQCRVY
CDGTHANLSTKLCKLEREQTSKLLDTQLFLTELQGYFLHARPPPRFHVQLFFECCDPSVD
NRPLTVQVEPLFVRQLLLLLQQGGVNYMRSTHELCPLTPEQVYPAHQDNPVISGHQTHGN
FIQE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaagctctgggaacgggaagttgcgtcagtggctgatcgagcaggtggactct
gggaaatatcccggcttagtttgggaggatcgcgagcggaccgtcttccgcatcccgtgg
aaacacgcagggaagcaggactacaacagagacgaggacgccgcgctcttcaaggcctgg
gctctttttaagggcaagtatcgcgagggaattgataaaccggatcctcccacctggaaa
acccggctcaggtgcgccttgaacaagagcagcgacttcgaggagctcgtgggccgaagt
cagctggatgtatcagaaccctttaaagtttaccgcgttatccctgagggaaccaaaaga
gcaccaaaatcatatgaaaaagtttccacaagcttgggtcaccataactacccgttttat
cctccatatgaacccgtggagggtcaggtgtgtaacttcctgtctgctgctgataggagc
tggagggacttcctgtgtgagcagaactcactgtccgacgtccacttcagccaaaactct
cgctgggacactgggtaccagataagtggctctttctacagctgtaacacgtttgactcg
cctccctctccgttcagcctggatgccagcatgagatcagctgaggccatggcactgtca
gacacccgtctgcaggtgacggtgttccgcggtgagactccggtcgcagacgtcaccgtc
atgagcgcagagggctgtcgactggctccacatgatgacaactggaccttcagcggcccg
ggtggcccggagctggttcctctccctcaggtggagagaggagcgctggaggggggcgtc
ctgctctggatgacgcccgacggcctgtacgcccgacgcttctgtcagtgcagggtctac
tgcgacgggacgcacgctaacctgagcaccaaactctgcaaactagagcgagagcagacc
agcaaactactggacacacagctcttcctgacagagctccagggttatttcctgcacgct
cgtcctcctccgcgtttccacgtgcagctgttttttgagtgctgcgatccctccgtagac
aacagacccctgacggtacaggtggagccgctgttcgtccgtcagctgctgctcctcctc
cagcagggcggtgtgaactacatgaggagcacccatgaactttgtcctctgacccctgag
caggtttaccccgcccaccaagataatcctgtcatcagcggacaccagacgcatggcaac
ttcatacaagagtga
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