Cyprinus carpio (common carp): 109066035
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Entry
109066035 CDS
T05134
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04145
Phagosome
ccar04217
Necroptosis
ccar04620
Toll-like receptor signaling pathway
ccar04621
NOD-like receptor signaling pathway
ccar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109066035
09143 Cell growth and death
04217 Necroptosis
109066035
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109066035
04621 NOD-like receptor signaling pathway
109066035
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109066035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109066035
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109066035
04090 CD molecules [BR:
ccar04090
]
109066035
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109066035
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Phagocytosis
Toll-like receptors
109066035
Pattern recognition receptors [BR:
ccar04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
109066035
CD molecules [BR:
ccar04090
]
Proteins
109066035
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Hyaluronan
Cell surface receptors
109066035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_5
LRR_14
LRR_9
LRRNT
ThsB_TIR
DUF4327
CT_C_D
Motif
Other DBs
NCBI-GeneID:
109066035
NCBI-ProteinID:
XP_042592483
Ensembl:
ENSCCRG00000020975
UniProt:
A0A9Q9WZJ0
LinkDB
All DBs
Position
B13:11698294..11702024
Genome browser
AA seq
818 aa
AA seq
DB search
MIMSYGEWMIFLGSVLFLASSGQGQECTTIIKNMEYSCSGRNLTQIPSSLPFTVMSLDFS
FNFLSSLHKCAFPVLVNLQVLDLTRCQIKHIENDTFYNVKNLTTLILTGNPITYFGPGCL
NSLHNLQRLVLVDVGLSSLQLQINNLTKLQELRVGTNNIQSMSLPSFMSTFKEFSLLDLH
ANNISIIKTDDTVLLREIGRNMTLILSRNQLLHIEPGAFKDIYLKEFHILSSFVSLNAQK
ECLEALTGLSVDKLFLGSYRMQWKVKVSNGSYLDGLCSIHFNEIYFVQKEFSDSEMHLFR
CMINATKITVKSGYIKSMKYIRFHRLKELYLGPTLLSAVPLISHIPSLEKLVVRNNMPMN
FYGISDLPLLKFVDLSGNFLILKDCCSQFFQRTPNIHYMNLSRNSEIGIADKPFSGLDLL
EVLDLHHTKLVLVFYFGFLHGLKYLKYLDISYTSITVTRQMIFQDLNNLTVLKMAGNSFH
GDALSYLLQNLTGLNVLDISHCGIEEISRRSFIGTQKIRYLYLSQNKLMILDFLALPNLK
QLTSLYVDKNSITSIPLHVLQKLPTNLSEFDLSSNPIDCSCSQTDFIWWIIQNQNVLKQP
ENIVCKTTDFRAKDFDIHSCVHKKRLTIVVSVCFVTVVVLLSFLVYRFPVYLQYCWILLR
GYRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIQLCLHMRDFQAGKSIASNI
IDEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFIMERNANIIIIILEDVEERKTKKV
FGLHKHLKKNTYLKWSRDPLSNMRFWIRLRKAIFATNQ
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtcatatggggaatggatgatttttctaggctcagtcttatttttggcgagt
tctggacaaggacaggaatgtaccacgataatcaagaacatggagtactcatgttctgga
agaaatttgactcaaattcccagcagtcttcccttcactgttatgtctctggatttcagt
ttcaatttcttgagctctttacataagtgtgcatttccagtattggtcaatttgcaagtc
ttggacctcacaagatgccaaatcaagcacattgaaaatgatactttctacaatgtgaag
aatttgactactttgattctcactggaaaccctattacatattttggacctggatgcttg
aattctttacataatctacaaagactagttcttgtggatgttggtctctcatcattacag
cttcaaataaataacctaaccaagctgcaggagcttagagtcgggacaaataacatccag
tccatgtctctcccttcattcatgagcaccttcaaagagttcagtttacttgatctacat
gccaataatatatccatcataaaaaccgatgacacagttttgttgcgagaaatcggcaga
aacatgactttgattctctctaggaatcaattattacacattgaaccaggagctttcaaa
gatatttatctcaaggagtttcacatactatcttcctttgtttcattaaatgctcaaaag
gagtgtctagaagctcttactggtctcagtgtggataagttgttcttaggaagttataga
atgcaatggaaagtcaaggtttcaaatggaagttatcttgatggtctttgctcaattcat
ttcaatgaaatatattttgttcagaaagaattttctgactctgaaatgcacttgttccgt
tgtatgatcaatgcgacaaaaatcacagtgaaaagtggatatattaaaagcatgaaatat
attcgatttcatcgtcttaaagaactgtatttaggccccactttattatctgctgtacca
ttgatttcacacatacctagcttagaaaaactagtggtgaggaacaatatgcccatgaac
ttttatggtattagtgatttgcctcttcttaagtttgtagatttgagtggaaactttttg
attttgaaggactgttgttcccaattttttcaaaggacaccaaatattcattacatgaat
cttagtcgaaactcagagatagggattgcagataagccattttctggattagacttgctt
gaagtgttggacctccaccatacaaaactagtcctagttttttattttggatttttacat
ggtctgaaatatttaaagtatttggatatatcttacacaagtattactgtcacaagacaa
atgatttttcaggacctgaacaatttgactgtgcttaaaatggcaggaaacagttttcat
ggtgatgcattgagttacctcttgcaaaacctaacaggtttgaatgttcttgacatctca
cactgtggcattgaagaaatctccaggagatcatttattggcacccagaaaatacggtat
ttatatttaagtcaaaacaagttgatgattttggattttctggctctcccaaacctgaaa
caattaacatcactttatgtcgataaaaacagcattactagcatcccacttcatgttctt
caaaagttgcccacaaatctttcagagtttgatttatcttctaaccccattgattgctcc
tgctcccagacagattttatttggtggattatccaaaatcagaacgttttgaagcagccg
gaaaatattgtctgtaaaaccacagattttagagcaaaagactttgacattcacagctgt
gtgcacaagaaaagactcacaattgttgtatctgtatgttttgttacagtagtagttctt
ttgtcattcttggtttataggttcccagtttatcttcagtattgctggattctactgaga
ggctatagatcacctggacagcaagaatgttcttatgatgcatttgtgattttctccagc
tatgatgaagtctgggtcatgaatgaactgatggagaatctagagaacggtgttccacct
attcagctttgccttcatatgagggactttcaagcagggaagtccatcgcctccaacatt
atcgatgaaggaataatgggcagtcgtaaaatcattgtggtcgtgtctcaacacttcatt
gatagtgcctggtgtcgctttgagtttgagttagctcagtctcgctttataatggaacgc
aatgccaacatcataatcatcattctggaagatgtggaagagaggaagactaagaaagtg
tttggacttcataagcatctgaaaaagaacacatacctaaagtggagcagagaccctttg
agtaacatgagattctggatacgcctcaggaaagctatttttgccacaaaccaataa
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