KEGG   Cyprinus carpio (common carp): 109066035
Entry
109066035         CDS       T05134                                 
Name
(RefSeq) toll-like receptor 4
  KO
K10160  toll-like receptor 4
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04145  Phagosome
ccar04217  Necroptosis
ccar04620  Toll-like receptor signaling pathway
ccar04621  NOD-like receptor signaling pathway
ccar05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109066035
  09143 Cell growth and death
   04217 Necroptosis
    109066035
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    109066035
   04621 NOD-like receptor signaling pathway
    109066035
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109066035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccar04131]
    109066035
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ccar04054]
    109066035
   04090 CD molecules [BR:ccar04090]
    109066035
   00536 Glycosaminoglycan binding proteins [BR:ccar00536]
    109066035
Membrane trafficking [BR:ccar04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    109066035
Pattern recognition receptors [BR:ccar04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   109066035
CD molecules [BR:ccar04090]
 Proteins
  109066035
Glycosaminoglycan binding proteins [BR:ccar00536]
 Hyaluronan
  Cell surface receptors
   109066035
SSDB
Motif
Pfam: LRR_8 TIR LRR_4 TIR_2 LRR_5 LRR_14 LRR_9 LRRNT ThsB_TIR DUF4327 CT_C_D
Other DBs
NCBI-GeneID: 109066035
NCBI-ProteinID: XP_042592483
Ensembl: ENSCCRG00000020975
UniProt: A0A9Q9WZJ0
LinkDB
Position
B13:11698294..11702024
AA seq 818 aa
MIMSYGEWMIFLGSVLFLASSGQGQECTTIIKNMEYSCSGRNLTQIPSSLPFTVMSLDFS
FNFLSSLHKCAFPVLVNLQVLDLTRCQIKHIENDTFYNVKNLTTLILTGNPITYFGPGCL
NSLHNLQRLVLVDVGLSSLQLQINNLTKLQELRVGTNNIQSMSLPSFMSTFKEFSLLDLH
ANNISIIKTDDTVLLREIGRNMTLILSRNQLLHIEPGAFKDIYLKEFHILSSFVSLNAQK
ECLEALTGLSVDKLFLGSYRMQWKVKVSNGSYLDGLCSIHFNEIYFVQKEFSDSEMHLFR
CMINATKITVKSGYIKSMKYIRFHRLKELYLGPTLLSAVPLISHIPSLEKLVVRNNMPMN
FYGISDLPLLKFVDLSGNFLILKDCCSQFFQRTPNIHYMNLSRNSEIGIADKPFSGLDLL
EVLDLHHTKLVLVFYFGFLHGLKYLKYLDISYTSITVTRQMIFQDLNNLTVLKMAGNSFH
GDALSYLLQNLTGLNVLDISHCGIEEISRRSFIGTQKIRYLYLSQNKLMILDFLALPNLK
QLTSLYVDKNSITSIPLHVLQKLPTNLSEFDLSSNPIDCSCSQTDFIWWIIQNQNVLKQP
ENIVCKTTDFRAKDFDIHSCVHKKRLTIVVSVCFVTVVVLLSFLVYRFPVYLQYCWILLR
GYRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIQLCLHMRDFQAGKSIASNI
IDEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFIMERNANIIIIILEDVEERKTKKV
FGLHKHLKKNTYLKWSRDPLSNMRFWIRLRKAIFATNQ
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgatcatgtcatatggggaatggatgatttttctaggctcagtcttatttttggcgagt
tctggacaaggacaggaatgtaccacgataatcaagaacatggagtactcatgttctgga
agaaatttgactcaaattcccagcagtcttcccttcactgttatgtctctggatttcagt
ttcaatttcttgagctctttacataagtgtgcatttccagtattggtcaatttgcaagtc
ttggacctcacaagatgccaaatcaagcacattgaaaatgatactttctacaatgtgaag
aatttgactactttgattctcactggaaaccctattacatattttggacctggatgcttg
aattctttacataatctacaaagactagttcttgtggatgttggtctctcatcattacag
cttcaaataaataacctaaccaagctgcaggagcttagagtcgggacaaataacatccag
tccatgtctctcccttcattcatgagcaccttcaaagagttcagtttacttgatctacat
gccaataatatatccatcataaaaaccgatgacacagttttgttgcgagaaatcggcaga
aacatgactttgattctctctaggaatcaattattacacattgaaccaggagctttcaaa
gatatttatctcaaggagtttcacatactatcttcctttgtttcattaaatgctcaaaag
gagtgtctagaagctcttactggtctcagtgtggataagttgttcttaggaagttataga
atgcaatggaaagtcaaggtttcaaatggaagttatcttgatggtctttgctcaattcat
ttcaatgaaatatattttgttcagaaagaattttctgactctgaaatgcacttgttccgt
tgtatgatcaatgcgacaaaaatcacagtgaaaagtggatatattaaaagcatgaaatat
attcgatttcatcgtcttaaagaactgtatttaggccccactttattatctgctgtacca
ttgatttcacacatacctagcttagaaaaactagtggtgaggaacaatatgcccatgaac
ttttatggtattagtgatttgcctcttcttaagtttgtagatttgagtggaaactttttg
attttgaaggactgttgttcccaattttttcaaaggacaccaaatattcattacatgaat
cttagtcgaaactcagagatagggattgcagataagccattttctggattagacttgctt
gaagtgttggacctccaccatacaaaactagtcctagttttttattttggatttttacat
ggtctgaaatatttaaagtatttggatatatcttacacaagtattactgtcacaagacaa
atgatttttcaggacctgaacaatttgactgtgcttaaaatggcaggaaacagttttcat
ggtgatgcattgagttacctcttgcaaaacctaacaggtttgaatgttcttgacatctca
cactgtggcattgaagaaatctccaggagatcatttattggcacccagaaaatacggtat
ttatatttaagtcaaaacaagttgatgattttggattttctggctctcccaaacctgaaa
caattaacatcactttatgtcgataaaaacagcattactagcatcccacttcatgttctt
caaaagttgcccacaaatctttcagagtttgatttatcttctaaccccattgattgctcc
tgctcccagacagattttatttggtggattatccaaaatcagaacgttttgaagcagccg
gaaaatattgtctgtaaaaccacagattttagagcaaaagactttgacattcacagctgt
gtgcacaagaaaagactcacaattgttgtatctgtatgttttgttacagtagtagttctt
ttgtcattcttggtttataggttcccagtttatcttcagtattgctggattctactgaga
ggctatagatcacctggacagcaagaatgttcttatgatgcatttgtgattttctccagc
tatgatgaagtctgggtcatgaatgaactgatggagaatctagagaacggtgttccacct
attcagctttgccttcatatgagggactttcaagcagggaagtccatcgcctccaacatt
atcgatgaaggaataatgggcagtcgtaaaatcattgtggtcgtgtctcaacacttcatt
gatagtgcctggtgtcgctttgagtttgagttagctcagtctcgctttataatggaacgc
aatgccaacatcataatcatcattctggaagatgtggaagagaggaagactaagaaagtg
tttggacttcataagcatctgaaaaagaacacatacctaaagtggagcagagaccctttg
agtaacatgagattctggatacgcctcaggaaagctatttttgccacaaaccaataa

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