Cyprinus carpio (common carp): 109066126
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Entry
109066126 CDS
T05134
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109066126
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109066126
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109066126
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109066126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF
FN3_Tor_3rd
NDNF
fn3_2
hEGF
NDNF_C
Big_5
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
109066126
NCBI-ProteinID:
XP_042608026
Ensembl:
ENSCCRG00000029000
UniProt:
A0A9Q9XU55
LinkDB
All DBs
Position
A5:5955375..6015704
Genome browser
AA seq
1537 aa
AA seq
DB search
MGSGGLTFSCLVLSTLMTLNHAGLVKKMIRHRREALTIPGIHNVSFPSSSQPVVFNHVYN
IKVPGSSLCSVDLDSPVGSDLEQKDAPSGSEVTDHTLDSGNQIIFTHSINIPKQACGCTE
GLPHLKELLNRLEMLEGEVSTLREQCATETTCCSAQATGAVGTKPYCSGRGNYSTETCGC
ICEPGWKGPNCTVPDCPGDCNDQGRCINGKCECFNGFAGEDCSMETCLVDCGENGRCING
ACVCNEGFSGDDCTETDCLNNCLGRGRCVESECVCDEPWTGFDCSELICPHDCYDRGRCD
NGTCYCDKGYTGEDCGALACSNDCSGRGFCIDSRCECDAGYSGEDCSSLTCPNDCNQRGR
CFNGVCICETGYFGEDCGKLSCPNNCNSRGRCIDGHCKCNVGFQGHDCSEFSCPNDCNKR
GRCFNGQCVCEEGFGGEDCSIKTCLSDCYGRGQCVEGKCICFANFAGEDCSELSCPSNCL
NRGRCIAGQCVCDEGFTGEDCGQRKCPNDCLSRGRCVEGQCVCQEGFEGLDCSVATCPGN
CNNRGRCVSGKCVCDEGFVGDACEERSCPNDCNGAGQCVDGRCVCDEGYIGEDCSEVSPP
EDLTITDVTTEKVNLTWKNEMLVTEYLVTYVPTSPGGLQLDFSVPGDRTSATVSELEPGI
EYLINVYAILNNKKSVPVSARVATYLPQPKGLKFKSISDTSVEVLWDQLNFPFDGWELIF
RNKKEENGKIVNNLTPSQTNFKQPGLGPGQEYEVTLSVIKNNTRGPETSSTVVTRIDSPG
QIDVGDVTDRSAVISWSRPGAQVDGFRVSYGPSTDLLVHRDVDLLATDTQYSLEDLEPDT
EYRVSLSSKRGDVTSEPVFKSFTTGLDGPTDLKAVDQTDNSITLEWKNSRSSIDGYRIKY
GPIAGGAHGEDMFPRRAGDTTWATITGLKPGTEYGIGVTAVQNERESEPATTNALTDLDP
PRDLEVRDSTETTLELVWKRPRAKVSTYRLAFVSADGRREEVELPATTTAYTLSGLSPGM
RYTVTLVAERGRRRSAPATVTASTGLGALRDLRFSDITDTTAEVSWTRPRSQPDSYRITY
ISVQGGTPMILTADGSQSQVSLTNLIPGETYQVSVVAVKGLEESEPVPDTFTTALDMPHS
LIAVNVTDTKALLLWQPAVATVDGYVITYSADTVPPISEQVSGNTVEFEMSSLAPATQYT
VNVYAIRNREKSAPATTDFTTDVDAPRDLVASNIQTDSAVLSWTPPQAAITAYILTFEAS
DGDVRELHLESSATSHSLSDLRSSTEYTVRLQAVAEDKRSTQISSVFTTAGMRYRNTKDC
SETLLNGETASGPYTIYISGDEKQPVRVYCDMSSDGGGWMVFLRRQSGKLDFFRNWRNYS
AGFGDTNDEFWLGLSNLHKITSAGQYELRVDLRDGQESAFAVYDKFYIADPRSRYKIQIG
AYSGTAGDSLSYHQNRPFSTFDHDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDSSHS
KGINWFHWKGHEHSIPFAEMKIRPVNFRNLEGRRKRS
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaggaggcctgacattcagctgtttggttttgtccaccctgatgactctaaat
catgccggcctggtaaagaagatgatcagacaccggcgggaagctctgacgattcccgga
atacacaacgtatcctttccaagctcttctcaaccggtcgtttttaaccacgtctacaac
atcaaagttcccggtagctctctgtgctctgtggatctggactctcctgtcggttcagat
cttgagcagaaggatgcgccatctggctcagaagtaacagaccacacattagacagcggt
aatcagatcatcttcacccatagcatcaacatccccaagcaggcgtgtggctgtacggag
ggactgccgcacctgaaggagctcctgaatcggctggagatgttggagggcgaggtgtcg
acgctccgagagcaatgcgccacagaaaccacctgctgcagcgctcaggccacaggtgct
gtaggaacgaagccctactgcagcggccgtggaaactacagcacggagacctgcggctgt
atatgtgagcccgggtggaagggccccaactgcaccgttcccgactgtcccggagactgc
aacgaccagggccgctgtattaacggaaagtgtgagtgtttcaatggctttgcgggcgag
gactgtagcatggagacctgcctggttgactgcggtgagaacgggcggtgcattaatgga
gcatgtgtttgcaatgaaggcttctccggggacgattgcacggagacagattgtctcaac
aactgtttgggacgcggccgctgcgttgaaagcgagtgtgtctgcgatgagccctggact
ggattcgattgctccgagctcatctgtccgcatgactgctatgaccgcgggcgatgtgac
aacgggacttgttattgcgataaaggctacaccggagaggactgcggggcgctcgcttgt
tcaaacgattgctcaggacgaggtttttgtattgacagccgatgtgaatgtgacgctggt
tactccggcgaggattgttccagcttgacctgtccgaatgactgcaaccaaagagggcgc
tgtttcaatggcgtgtgcatttgtgaaacgggttatttcggagaggactgcgggaagctc
tcctgcccaaataactgcaacagtagagggcgctgcattgatggtcattgcaaatgtaat
gtcggattccaaggtcatgattgttcggagtttagctgccccaatgattgtaacaaacgg
ggtcgctgttttaacggccagtgcgtttgtgaagagggattcggtggcgaggactgcagc
atcaaaacctgcctgtcagactgctatggccgaggccagtgtgtggaagggaagtgcatt
tgctttgcgaacttcgccggcgaagactgcagtgaattgagctgcccgagcaactgcctc
aaccgtggacgttgcatcgcggggcaatgtgtttgcgacgaaggcttcaccggagaggac
tgtggtcagagaaagtgtcccaatgactgcctcagccgcggacgctgcgtggagggacag
tgtgtttgccaggagggttttgagggcctggactgctccgttgccacctgtcctggaaac
tgcaataaccgtgggcgctgcgtcagtgggaaatgtgtgtgtgatgagggatttgttggt
gatgcctgtgaagaaagaagctgtccgaatgactgcaatggtgcggggcaatgtgtggac
ggccgctgtgtatgcgatgaaggctacattggcgaggattgctcagaagtctcaccaccg
gaagacctgaccattacggatgtgaccacggagaaggtgaacctcacatggaagaacgag
atgctggtgacggagtatttggttacatacgtcccgacgtcaccaggcggcctgcagttg
gacttcagcgtgcctggagatcgtacatctgctaccgtctctgagctggagccaggaatc
gagtatctcatcaacgtttatgccatcctcaacaacaagaagagcgttcctgtcagcgcc
agagtggccacatatctaccgcagcccaagggcctgaagtttaaatccatcagtgatacg
tctgtggaggttttgtgggaccagctgaactttccattcgacggctgggagctcatcttt
cgtaacaagaaagaagaaaacgggaagatcgtgaacaatctgacaccttcccagaccaac
tttaagcaacctggactcggccccggccaggaatatgaagtcactttgtccgtcattaag
aacaacaccagaggacccgaaaccagctccactgtagtaacaagaatcgattctccgggg
cagattgatgttggtgatgtgacagaccggtctgcagtgatctcctggtccaggcccggg
gctcaggtggacgggttcagggtgtcgtacgggccgagcacagacctgttagtccatcga
gatgtcgacctcctggccacagacacgcagtacagcctggaggacctggaaccagacact
gaatacagagtgtctctcagttcaaagaggggagacgtgaccagcgagcccgtctttaag
agcttcaccacgggtctggatggccccactgacctcaaagctgttgatcagactgacaac
agcatcacactggaatggaaaaacagccgttcatccattgacggataccgtatcaagtac
ggcccgatcgcaggaggtgctcatggtgaagacatgttccctagaagagctggagacaca
acatgggccacaattacaggcctgaagcctggaacggagtatggcattggagtcacagcc
gttcagaatgaaagagagagtgagccagcgaccaccaacgcactgaccgatctggatcct
ccacgagacttggaagtgcgagactccaccgaaaccaccctggaactggtctggaagagg
cccagggccaaggtctccacctacaggctagcgtttgtctctgccgacggccgaagggaa
gaagtcgagctgcctgctaccacaactgcatacaccttgagcggcttgagccctggcatg
cgctacaccgtcaccctcgtggcagaacgcggacggaggagaagtgctcctgccaccgtc
accgcatccacaggccttggagctctacgggaccttcgtttctctgacatcacggacaca
acagctgaggtttcctggactcgaccgcgatcccaaccggactcctacagaatcacttac
atctccgtccaaggaggtactcctatgatcttgacggcggacgggtcacagtctcaggtt
tcgctgacgaatctgattcctggagagacgtatcaggtgtcagttgttgcagtgaaaggt
ctggaggagagcgaaccagtgcctgacacttttactacagccctggatatgccacacagc
ctgattgctgtcaatgtcacggacacaaaggcgctgttgctgtggcaacctgccgtggcg
accgtggatggatatgtcatcacatacagcgcagacactgtgccaccgatatcagagcag
gtttctggaaacacggtggagtttgagatgagttcactggctccagcaactcaatacact
gtcaatgtttatgccatcagaaaccgagagaaaagtgctccagcaaccacagacttcacc
acagatgtggacgctccgcgtgatctggttgccagtaatattcagacagacagtgccgtt
ctcagctggacgccgccgcaggccgccatcactgcatatatcctgacctttgaagcatct
gacggggatgtcagggaactgcatctcgagtcgtctgcgacctctcacagtctgtctgat
ctgagaagcagcactgaatacacagtccgactgcaggcggtcgctgaggacaagaggagc
acacagatcagcagcgtcttcaccacagctggcatgcgctacagaaacaccaaggactgc
tcagaaacgctgctgaacggagagacggcctccggtccatacaccatttacatcagcgga
gacgagaagcagcccgtccgagtttactgtgacatgagctccgacggcggtggctggatg
gtgttcctacggcgtcagagcggcaagctggatttcttcaggaactggaggaactactct
gcaggattcggggacacgaacgatgagttctggctcggactttcaaatcttcacaaaatc
acctcagccggtcagtacgagttacgtgtggacctgcgtgacggacaggagagtgcgttt
gcagtctacgataaattttacatcgcagatcctcgttcccgctacaagatccagattggt
gcatacagtggcaccgcaggtgattccttgtcatatcatcagaacaggccattctccacc
tttgaccatgacaatgacatcgcggtcaccaactgtgccctgtcctacaagggagcgttc
tggtataaaaactgccatcgagtgaacctgatggggaaatatggagacagcagccacagc
aaagggatcaattggttccactggaaaggccacgagcattcgattccattcgcagagatg
aagatccggccagtcaatttcagaaacttggaaggcagacggaaaagatcatag
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integrated database retrieval system