KEGG   Cyprinus carpio (common carp): 109066126
Entry
109066126         CDS       T05134                                 
Name
(RefSeq) tenascin-like isoform X1
  KO
K06252  tenascin
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04510  Focal adhesion
ccar04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109066126
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109066126
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ccar00536]
    109066126
Glycosaminoglycan binding proteins [BR:ccar00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109066126
SSDB
Motif
Pfam: fn3 EGF_TEN EGF_Teneurin Fibrinogen_C EGF_2 EGF_Tenascin Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Fn3_Dep-1_2nd EGF FN3_Tor_3rd NDNF fn3_2 hEGF NDNF_C Big_5 Lzipper-MIP1
Other DBs
NCBI-GeneID: 109066126
NCBI-ProteinID: XP_042608026
Ensembl: ENSCCRG00000029000
UniProt: A0A9Q9XU55
LinkDB
Position
A5:5955375..6015704
AA seq 1537 aa
MGSGGLTFSCLVLSTLMTLNHAGLVKKMIRHRREALTIPGIHNVSFPSSSQPVVFNHVYN
IKVPGSSLCSVDLDSPVGSDLEQKDAPSGSEVTDHTLDSGNQIIFTHSINIPKQACGCTE
GLPHLKELLNRLEMLEGEVSTLREQCATETTCCSAQATGAVGTKPYCSGRGNYSTETCGC
ICEPGWKGPNCTVPDCPGDCNDQGRCINGKCECFNGFAGEDCSMETCLVDCGENGRCING
ACVCNEGFSGDDCTETDCLNNCLGRGRCVESECVCDEPWTGFDCSELICPHDCYDRGRCD
NGTCYCDKGYTGEDCGALACSNDCSGRGFCIDSRCECDAGYSGEDCSSLTCPNDCNQRGR
CFNGVCICETGYFGEDCGKLSCPNNCNSRGRCIDGHCKCNVGFQGHDCSEFSCPNDCNKR
GRCFNGQCVCEEGFGGEDCSIKTCLSDCYGRGQCVEGKCICFANFAGEDCSELSCPSNCL
NRGRCIAGQCVCDEGFTGEDCGQRKCPNDCLSRGRCVEGQCVCQEGFEGLDCSVATCPGN
CNNRGRCVSGKCVCDEGFVGDACEERSCPNDCNGAGQCVDGRCVCDEGYIGEDCSEVSPP
EDLTITDVTTEKVNLTWKNEMLVTEYLVTYVPTSPGGLQLDFSVPGDRTSATVSELEPGI
EYLINVYAILNNKKSVPVSARVATYLPQPKGLKFKSISDTSVEVLWDQLNFPFDGWELIF
RNKKEENGKIVNNLTPSQTNFKQPGLGPGQEYEVTLSVIKNNTRGPETSSTVVTRIDSPG
QIDVGDVTDRSAVISWSRPGAQVDGFRVSYGPSTDLLVHRDVDLLATDTQYSLEDLEPDT
EYRVSLSSKRGDVTSEPVFKSFTTGLDGPTDLKAVDQTDNSITLEWKNSRSSIDGYRIKY
GPIAGGAHGEDMFPRRAGDTTWATITGLKPGTEYGIGVTAVQNERESEPATTNALTDLDP
PRDLEVRDSTETTLELVWKRPRAKVSTYRLAFVSADGRREEVELPATTTAYTLSGLSPGM
RYTVTLVAERGRRRSAPATVTASTGLGALRDLRFSDITDTTAEVSWTRPRSQPDSYRITY
ISVQGGTPMILTADGSQSQVSLTNLIPGETYQVSVVAVKGLEESEPVPDTFTTALDMPHS
LIAVNVTDTKALLLWQPAVATVDGYVITYSADTVPPISEQVSGNTVEFEMSSLAPATQYT
VNVYAIRNREKSAPATTDFTTDVDAPRDLVASNIQTDSAVLSWTPPQAAITAYILTFEAS
DGDVRELHLESSATSHSLSDLRSSTEYTVRLQAVAEDKRSTQISSVFTTAGMRYRNTKDC
SETLLNGETASGPYTIYISGDEKQPVRVYCDMSSDGGGWMVFLRRQSGKLDFFRNWRNYS
AGFGDTNDEFWLGLSNLHKITSAGQYELRVDLRDGQESAFAVYDKFYIADPRSRYKIQIG
AYSGTAGDSLSYHQNRPFSTFDHDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDSSHS
KGINWFHWKGHEHSIPFAEMKIRPVNFRNLEGRRKRS
NT seq 4614 nt   +upstreamnt  +downstreamnt
atgggttcaggaggcctgacattcagctgtttggttttgtccaccctgatgactctaaat
catgccggcctggtaaagaagatgatcagacaccggcgggaagctctgacgattcccgga
atacacaacgtatcctttccaagctcttctcaaccggtcgtttttaaccacgtctacaac
atcaaagttcccggtagctctctgtgctctgtggatctggactctcctgtcggttcagat
cttgagcagaaggatgcgccatctggctcagaagtaacagaccacacattagacagcggt
aatcagatcatcttcacccatagcatcaacatccccaagcaggcgtgtggctgtacggag
ggactgccgcacctgaaggagctcctgaatcggctggagatgttggagggcgaggtgtcg
acgctccgagagcaatgcgccacagaaaccacctgctgcagcgctcaggccacaggtgct
gtaggaacgaagccctactgcagcggccgtggaaactacagcacggagacctgcggctgt
atatgtgagcccgggtggaagggccccaactgcaccgttcccgactgtcccggagactgc
aacgaccagggccgctgtattaacggaaagtgtgagtgtttcaatggctttgcgggcgag
gactgtagcatggagacctgcctggttgactgcggtgagaacgggcggtgcattaatgga
gcatgtgtttgcaatgaaggcttctccggggacgattgcacggagacagattgtctcaac
aactgtttgggacgcggccgctgcgttgaaagcgagtgtgtctgcgatgagccctggact
ggattcgattgctccgagctcatctgtccgcatgactgctatgaccgcgggcgatgtgac
aacgggacttgttattgcgataaaggctacaccggagaggactgcggggcgctcgcttgt
tcaaacgattgctcaggacgaggtttttgtattgacagccgatgtgaatgtgacgctggt
tactccggcgaggattgttccagcttgacctgtccgaatgactgcaaccaaagagggcgc
tgtttcaatggcgtgtgcatttgtgaaacgggttatttcggagaggactgcgggaagctc
tcctgcccaaataactgcaacagtagagggcgctgcattgatggtcattgcaaatgtaat
gtcggattccaaggtcatgattgttcggagtttagctgccccaatgattgtaacaaacgg
ggtcgctgttttaacggccagtgcgtttgtgaagagggattcggtggcgaggactgcagc
atcaaaacctgcctgtcagactgctatggccgaggccagtgtgtggaagggaagtgcatt
tgctttgcgaacttcgccggcgaagactgcagtgaattgagctgcccgagcaactgcctc
aaccgtggacgttgcatcgcggggcaatgtgtttgcgacgaaggcttcaccggagaggac
tgtggtcagagaaagtgtcccaatgactgcctcagccgcggacgctgcgtggagggacag
tgtgtttgccaggagggttttgagggcctggactgctccgttgccacctgtcctggaaac
tgcaataaccgtgggcgctgcgtcagtgggaaatgtgtgtgtgatgagggatttgttggt
gatgcctgtgaagaaagaagctgtccgaatgactgcaatggtgcggggcaatgtgtggac
ggccgctgtgtatgcgatgaaggctacattggcgaggattgctcagaagtctcaccaccg
gaagacctgaccattacggatgtgaccacggagaaggtgaacctcacatggaagaacgag
atgctggtgacggagtatttggttacatacgtcccgacgtcaccaggcggcctgcagttg
gacttcagcgtgcctggagatcgtacatctgctaccgtctctgagctggagccaggaatc
gagtatctcatcaacgtttatgccatcctcaacaacaagaagagcgttcctgtcagcgcc
agagtggccacatatctaccgcagcccaagggcctgaagtttaaatccatcagtgatacg
tctgtggaggttttgtgggaccagctgaactttccattcgacggctgggagctcatcttt
cgtaacaagaaagaagaaaacgggaagatcgtgaacaatctgacaccttcccagaccaac
tttaagcaacctggactcggccccggccaggaatatgaagtcactttgtccgtcattaag
aacaacaccagaggacccgaaaccagctccactgtagtaacaagaatcgattctccgggg
cagattgatgttggtgatgtgacagaccggtctgcagtgatctcctggtccaggcccggg
gctcaggtggacgggttcagggtgtcgtacgggccgagcacagacctgttagtccatcga
gatgtcgacctcctggccacagacacgcagtacagcctggaggacctggaaccagacact
gaatacagagtgtctctcagttcaaagaggggagacgtgaccagcgagcccgtctttaag
agcttcaccacgggtctggatggccccactgacctcaaagctgttgatcagactgacaac
agcatcacactggaatggaaaaacagccgttcatccattgacggataccgtatcaagtac
ggcccgatcgcaggaggtgctcatggtgaagacatgttccctagaagagctggagacaca
acatgggccacaattacaggcctgaagcctggaacggagtatggcattggagtcacagcc
gttcagaatgaaagagagagtgagccagcgaccaccaacgcactgaccgatctggatcct
ccacgagacttggaagtgcgagactccaccgaaaccaccctggaactggtctggaagagg
cccagggccaaggtctccacctacaggctagcgtttgtctctgccgacggccgaagggaa
gaagtcgagctgcctgctaccacaactgcatacaccttgagcggcttgagccctggcatg
cgctacaccgtcaccctcgtggcagaacgcggacggaggagaagtgctcctgccaccgtc
accgcatccacaggccttggagctctacgggaccttcgtttctctgacatcacggacaca
acagctgaggtttcctggactcgaccgcgatcccaaccggactcctacagaatcacttac
atctccgtccaaggaggtactcctatgatcttgacggcggacgggtcacagtctcaggtt
tcgctgacgaatctgattcctggagagacgtatcaggtgtcagttgttgcagtgaaaggt
ctggaggagagcgaaccagtgcctgacacttttactacagccctggatatgccacacagc
ctgattgctgtcaatgtcacggacacaaaggcgctgttgctgtggcaacctgccgtggcg
accgtggatggatatgtcatcacatacagcgcagacactgtgccaccgatatcagagcag
gtttctggaaacacggtggagtttgagatgagttcactggctccagcaactcaatacact
gtcaatgtttatgccatcagaaaccgagagaaaagtgctccagcaaccacagacttcacc
acagatgtggacgctccgcgtgatctggttgccagtaatattcagacagacagtgccgtt
ctcagctggacgccgccgcaggccgccatcactgcatatatcctgacctttgaagcatct
gacggggatgtcagggaactgcatctcgagtcgtctgcgacctctcacagtctgtctgat
ctgagaagcagcactgaatacacagtccgactgcaggcggtcgctgaggacaagaggagc
acacagatcagcagcgtcttcaccacagctggcatgcgctacagaaacaccaaggactgc
tcagaaacgctgctgaacggagagacggcctccggtccatacaccatttacatcagcgga
gacgagaagcagcccgtccgagtttactgtgacatgagctccgacggcggtggctggatg
gtgttcctacggcgtcagagcggcaagctggatttcttcaggaactggaggaactactct
gcaggattcggggacacgaacgatgagttctggctcggactttcaaatcttcacaaaatc
acctcagccggtcagtacgagttacgtgtggacctgcgtgacggacaggagagtgcgttt
gcagtctacgataaattttacatcgcagatcctcgttcccgctacaagatccagattggt
gcatacagtggcaccgcaggtgattccttgtcatatcatcagaacaggccattctccacc
tttgaccatgacaatgacatcgcggtcaccaactgtgccctgtcctacaagggagcgttc
tggtataaaaactgccatcgagtgaacctgatggggaaatatggagacagcagccacagc
aaagggatcaattggttccactggaaaggccacgagcattcgattccattcgcagagatg
aagatccggccagtcaatttcagaaacttggaaggcagacggaaaagatcatag

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