Cyprinus carpio (common carp): 109066169
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Entry
109066169 CDS
T05134
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03420
Nucleotide excision repair
ccar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109066169
09124 Replication and repair
03420 Nucleotide excision repair
109066169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109066169
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109066169
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
109066169
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109066169
TCR (transcription coupled repair) factors
Cul4-CSA complex
109066169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
109066169
NCBI-ProteinID:
XP_042599290
UniProt:
A0A9R0AIH8
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All DBs
Position
B18:complement(176603..207195)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACVTGHFTSSEDLNLLIAKNTRLEIYAVTAEGLRPVRELGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGV
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVQFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSESGRD
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFFCGNVVHQQLIQITSVSVRLVT
QDSKALVSEWKEPQGRNISVASCNSTQVVLAVGRVLYYLQILSGELKQISSTEMEHEVAC
LDITPLGESAGESSICAVGLWTDISARLLKLPCFSPLHKEMLGGEIIPRSILMTTFEGSH
YLLCALGDGALFYFSHKNKTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PKRICYQEVSQCFGVLSSRVEMQDTSGTTAAVRPSASTQALSSSVSSSKLFPSSTSPHET
SFGEEVEVHSLLVVDQHTFEVLHAHQFLQNEYALSMVSCKLGRDPAVYFIVGTAMVYPEE
AEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFSGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKSMEGSFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFSHGSLVLQNLGES
STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTER
KTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQMDDGSGMKREATVDEVIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaactatgtggtgacggcgcagaagcccacggcggtgaacgcctgcgtcacg
ggtcacttcacgtcctccgaggacctgaacctgctgatcgctaagaacacgcggctggag
atctacgcggtgaccgccgaggggctgcggccggtcagggagctcggcatgtacggcaag
atcgcggtcatggagctcttcagacccaagggtgagagcaaagatcttctgttcattctg
accgctaaatacaacgcctgtatcctggagtacaagcagaacggagacagcatcgacatc
atcacccgcgctcacggaaacgtgcaggatcggatcggccgtccgtctgagaccggggtc
atcgggatcgtggatccggagtgtcgtatgatcggcttgcggctgtacgacgggctgttt
aaggtcattcctctggaccgcgataaccgcgagctcaaagccttcaacattcgtctggag
gagctgcaggtcattgacgtccagttcctgtacggctgccaggcgcccaccgtctgcttc
atatatcaggatcctcagggtcggcacgtcaagacatacgaggtttctctcagagagaaa
gagttcaacaaaggaccctggaagcaggagaacgtggaagctgaagcatcgatggtcatt
ccagtcccagagccgtttggaggagctataatcatcggacaggagtccatcacttatcac
aacggagacaaatacttagccatcgctccaccaactatcaagcaaagcaccatcgtgtgt
cataaccgcgtggatccgaacggctcgcggtacctgctgggagacatggagggccgactc
ttcatgctgctgctggagaaagaggagctgatggacggagccgtggtgctcaaagacctg
cacgtggagctgctgggagagacctccatcgccgagtgtctgacgtatctggataacggt
gtggtgtttgtggggtccagactaggagattctcagctagttaagctgaatgtggacagt
aatgaccagggctcgtatgtggctgtaatggagaccttcactaacctggggccgatagtg
gacatgtgtgtggtggacctggagagacaaggacagggtcagctggtgacctgctccgga
gcgtttaaggaaggctctctccggatcattcggaatggcatcgggatccatgagcacgcc
agcatcgacctgcccggcatcaaaggtctgtggcctctccgctccgagtcgggcagagac
actgatgacatgctggttctgtcgtttgtgggtcagaccagggtgctgatgctgagtgga
gaggaggtggaggagacggagctgccggggtttgtggataatcagcagacgttcttctgt
gggaatgtagtgcatcagcagctcatacagatcacgtcggtgtctgtgaggctggtcact
caggacagcaaggctctggtgagcgagtggaaggagcctcagggcaggaacatcagcgtg
gcgtcctgcaacagcactcaggtggttctggctgtgggtcgagtgctgtattaccttcag
atactctcaggagaactcaaacagatcagctctacagagatggagcatgaggtggcgtgt
ctggacatcactcctctgggcgagagcgcaggagaatccagcatctgtgctgtgggactc
tggaccgacatctcggcccgcctgctcaagttaccctgcttcagcccgctgcacaaagag
atgctgggcggagagatcatccctcgctccatcctcatgaccacgtttgagggaagtcat
tacctgctgtgtgcgctgggagacggggcacttttctatttctcacacaaaaacaaaaca
ggtgttctgagtgagcgtaagaaggtgactctgggcactcagcccacggttctgcgcacc
ttccgctcgctctccacctccaacgtgttcgcctgctccgaccggcccaccgtcatctac
tccagcaaccacaaactggtcttctctaacgtcaacctgaaggaggtcaactacatgtgc
ccgctcaactccgagggataccccgacagtctggctctggccaacaacagcactctgacc
atcggcactatcgatgagatccagaagctccacatccgaaccgttcctctctacgagtcg
cccaagcggatctgctatcaggaggtgtctcagtgtttcggagttttgtccagtagagta
gagatgcaggacaccagtggaaccactgcagccgtgcggcccagcgccagcacacaggca
ctctccagcagcgtcagctccagtaagctgtttcccagcagcacttctcctcacgagacg
tcgttcggagaggaggtggaggtgcacagtctgctggtggtggatcagcacacgtttgag
gtgctgcatgcgcatcagttcctgcagaacgagtacgcgctcagtatggtgtcctgtaag
ctgggcagagatcctgccgtctacttcatcgtcggcaccgccatggtgtatccggaggag
gcggagcctaaacagggccgcatcatcgtctttcactatacagacggcaaactgcagacg
gtggcagagaaggaggttaaaggtgcggtttactccatggtggagtttagtggcaaactg
ctggccagcatcaacagcaccgtgcgtctgtacgagtggacggcagagaaggagctgagg
accgagtgcaatcactataataacatcatggccctgtatctgaagactaaaggggacttc
atcctggtgggggacctgatgcgctccgtgctgctgctggcctacaaatccatggagggc
agcttcgaggagattgctcgtgatttcaatcctaactggatgagtgctgttgaaatcctg
gatgatgacaacttcctcggagcggagaacgctttcaacctgttcgtctgccagaaggac
agcgcggcgactacagacgaggagcggcagcacctgcaggaggtgggtctgttccacctg
ggagagtttgtcaacgtgttctcacacggatctctggtgctgcagaatctgggcgagagc
tcgaccccgacacagggctcggtgctgttcggaaccgttaacggcatgatcggtttggtg
acgtcgctgtcggagggctggtacagtttactgctggatctacagaaccgactcaacaaa
gtcatcaagagcgtgggcaagatcgagcacagcttctggaggtcgttccacaccgagcgt
aagactgagcaggccacagggttcattgatggagatctgatcgagagcttcctggatctg
ggtcgagcgaagatgcaggaggtggtcagcacactgcagatggatgacggcagtgggatg
aagcgtgaggcgactgtggacgaggtgattaaaatcgtggaggagctgacgcggatccac
taa
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