Cyprinus carpio (common carp): 109066294
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Entry
109066294 CDS
T05134
Name
(RefSeq) transcription factor SOX-6-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109066294
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109066294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109066294
NCBI-ProteinID:
XP_018938846
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MSSKQATSPFPSTPDGGEDGVNQECMSWEKDENSESLIAPQLPLHNLLHNKPPLEELQPI
SSSVPPESDWDSLLSAQQRMESDSNKVCSLYSFRNNSTSPHKPEEGARERGDLLSSSAFG
TPERRKGSLADVVDTLKQKKLEEMTKTEQDESSCMEKLLSKDWKEKMERLNTGELLGEIK
GTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQMEKQRQQMELARQQQEQIA
RQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGMSYK
PGDNYPVQFIPSTMAAAAASGLNPLQLQVSTLRAQLASMQVSPGAKMPPLPQPPNSTGPI
SPSGLKNEKRASTPLAQVKEEGTQPLNLSARPKTAEPVRSPTSPTQSLFPGNKSSPNSLS
KSRGIPSPIGGMGRGSSLDILSSLNSTALFGDQDAVMKAIQEARKMREQIQREQLQHHQQ
GMEAKLSALTSMGLNNCRADKERSHYENLGHHLGKLGEDGKIGHRVIDLTRPEDFEGGAS
TAEARVYREPRGRNSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKS
MTNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEM
RQFFTVGQQPQTQIPITTSAGVVYPGAITMATTTPSPHMTSDCSSASASPEPTIPVIQST
FNMKMEPGTMVSNDPVNGEDEMDMYEDFEDEPKSDYSSENETQEPVSAN
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaagccacctctccatttccctcgacccctgacggaggcgaggatgga
gtgaatcaggagtgcatgtcctgggaaaaagatgagaactcagagtcactaatcgcccct
cagcttcccctgcacaatctgctccacaacaaacctcccctggaggagctccagccaatc
agcagcagcgtgccgcccgaatctgactgggacagcctgctgtcggcccagcagcgcatg
gaatcggacagtaataaagtatgttccttatactccttccggaataactctacctctcca
cacaagccagaggagggggccagggagcgcggtgacctgctgagcagttcagccttcgga
acgccagagcgccgcaaaggaagcctggccgatgtggtggacacactgaaacagaagaaa
ctagaggagatgacaaagacagagcaagacgaatcctcctgcatggagaaactcctttct
aaagactggaaagagaagatggagcgactcaacacaggagagctgttaggagaaattaaa
ggtactccggaaagtctcgcggagaaggagcgacagctctccaccatgatcacacagctc
atcagcctgcgagagcaactcctggccgcccatgatgagcagaagaaactggccgcctca
cagatggagaaacaacgtcagcaaatggagctggcacgccaacagcaagagcagattgcc
agacaacagcagcaacttctgcagcaacagcacaaaatcaatctcctccagcagcagatc
caggtccagggtcacatgcctccactcatgatccccatttttccacacgaccagcgcact
ctggcagcagctgcggcagcccagcagggcttcctcttccccccaggcatgtcctataag
ccaggtgataactacccggtgcagttcattccatccacaatggcagctgctgccgcgtca
ggactcaaccctctccagctccaggtatcaactctacgcgcccagctggccagcatgcag
gtctctccaggagccaagatgcctccgttaccccagccccccaattctactgggccgatc
tccccgtctggcttgaagaatgaaaagagggcctcaacccccctggctcaagtcaaggag
gagggaacgcagcctctcaacctctccgcccggcccaagacagctgagcccgtcagatcc
cccacatccccgacacagagcctcttcccaggcaacaagagcagcccgaacagcctgtcc
aagagcagaggcatccccagccccatcggaggaatgggccgtggctcgtctctggacatt
ctgtctagcctgaactcaacagcgctgtttggagatcaggatgcagtgatgaaggccatc
caggaagcgaggaagatgagggagcagattcagagagagcagcttcagcaccatcagcag
ggaatggaggccaagctgtccgccctcaccagcatgggcctgaacaactgcagggctgat
aaggagaggtctcattatgagaacctgggccatcacctgggcaaactaggcgaggatggg
aagattggtcacagagtcatcgacctcaccaggccagaggattttgagggaggcgccagc
actgccgaggcacgggtctacagggaaccccggggaaggaacagcaacgaacctcacatc
aaacggcccatgaacgccttcatggtctgggccaaagatgagcgccgcaaaatccttcag
gccttcccagacatgcacaactccaacatcagcaaaatcttggggtctcgctggaagtcc
atgacgaaccaggagaaacaaccgtattatgaggagcaggcacggctcagcaagatccac
ctggagaagtatcccaactacaagtacaagccccggcccaagcgcacctgcatcatcgac
ggcaagaagctgcgcataggcgagtacaagcagatgatgaggtcaaggaggcaggagatg
aggcagttcttcactgtggggcagcagccacagacgcagatccccatcaccaccagcgca
ggtgtcgtataccccggtgccataacaatggcgaccactacgccctcccctcacatgacg
tcagactgctccagtgcctcagccagccccgagcccaccatccccgtcatccagagcacc
ttcaacatgaagatggaaccgggcaccatggtgtctaacgaccccgtgaacggagaggac
gagatggacatgtacgaggactttgaggacgagcccaaatcggactacagcagtgagaat
gaaacacaggagccggtcagtgccaactga
DBGET
integrated database retrieval system