Cyprinus carpio (common carp): 109066474
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Entry
109066474 CDS
T05134
Symbol
sort1a
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109066474 (sort1a)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
DUF6242_C
Motif
Other DBs
NCBI-GeneID:
109066474
NCBI-ProteinID:
XP_042589775
Ensembl:
ENSCCRG00000038107
UniProt:
A0A9Q9WUG6
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Position
B11:9932516..9954028
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AA seq
815 aa
AA seq
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MSTVFCCVLVVLFSVALCMDFEERPSSSRRSEQTMFLKSHKSRNLLSLRDLQEPDHVKMK
RSEESAQNQCQSLHGYDSTLKNNTHTHNFNDLSGTVSLAWVGDSTGVLLVLTTFQVPLFI
MRFGQSRLYRSEDYGKTFQDITDLINNTFIQTEFGIAIGPENSGKVILTGDLTEGRVTKI
FRSDDFGRSFLTSELPFHPLMQIRYNPRDSNILVVYSINYDLWLSVDFGANWRKIHETVC
LMKWGIDDTIFLTTNPNGSCSDRGMLELRKSLDYGKTFKTIGSRIYSFGLGGRFVFASIM
TDSGSTRMIHVSVDQGETWDMAQLPTVGHEQFYSILAANNDMIFMHVDEPGDSGIGSIYV
SDDRGIVFSKSLERHLYTSTGGDTDFTNITSLRGVYMTSILAVDGSVQTVITFNQGGEWR
TLQRPWNGECDSTTVHPDKCSLHIHASYSISMKLNVPMQPLSEPNAVGLILAHGSVGGAV
SVLSPDVFVSEDGGYTWFQALKGPHHYAILDSGGLLVAVEHNPSHPISQIKFSTDEGQCW
HVHNFTDEPMYFTGLASEPGARSMNISLWGYRETVLNQYWVSVTIDFRQLLSRDCQENDY
IQWLAHSSDISDPTDGCMLGYKERFLRLRKDSVCWNGRDYIVTKEPTTCPCTLNDFQCDF
GFYHAENSSVCVEQPDLIGHSLEFCLHGRKEQLQTSGYRKIPGDHCEGGITPERKEIDLS
KKCVSNLLRTEPLTEEHSFNSAPIIVVVIAVLLISAVAGVIFIKKYVCGGRFLVHRYSVL
QQHAEANGIEGVDDLDTLEGGKTHYRDDSDEDLLE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgtattctgctgtgttttggttgtattattctcagtggctctttgcatggac
tttgaagagagacccagcagctccaggaggagtgagcaaactatgtttctaaagagtcac
aaatcacgaaacctgctcagtttgagggatttacaggagccagaccatgtcaagatgaag
aggagtgaagaatccgcgcaaaatcagtgtcaatcactgcacggatatgattctacttta
aaaaacaatactcatacgcataacttcaatgacttgagtggcacagtgtctctggcctgg
gttggagacagcacaggggttctgctggtgctgaccacattccaggttcctctttttatc
atgcggtttggtcagtccagactgtacagaagtgaagactatggaaagacattccaggac
atcaccgacctcattaacaacaccttcatacagacagagtttggcatcgcgattggtccc
gaaaattcagggaaggtgatcctcacaggtgatctaaccgaagggagagttaccaaaatt
ttccgttcggatgatttcggcaggagctttttgacctctgagcttcccttccatccgtta
atgcaaatcagatacaaccccagagacagcaacatactggtggtctacagcatcaattat
gacttatggctgtctgtagactttggggccaattggaggaagatccatgagactgtgtgt
cttatgaaatggggaattgatgacactattttcttaaccacaaaccccaatggatcctgc
agtgatcggggaatgcttgagctgaggaaatctttagactatggcaaaacattcaaaact
ataggaagcaggatttattcctttggcctgggtggacgctttgtttttgcctcaatcatg
accgactcgggttccactcgcatgattcatgtctcagtagatcagggggagacgtgggat
atggctcaactccccaccgttggacacgagcagttttactccattctagccgcaaacaac
gatatgatcttcatgcacgtggatgaacctggagactccggtattggcagcatatatgtg
tcagatgaccgaggtatagtgttctccaagtctctggaacgtcatttgtacacctctaca
ggcggagacactgacttcaccaacatcacctctctgaggggcgtatatatgaccagtatc
ctcgccgtggatggctctgtgcagacagtgatcacatttaatcaaggtggagagtggcga
acactgcagagaccctggaacggagagtgtgactccactactgtgcacccggacaaatgt
agtctgcatattcatgcctcctacagcatctctatgaaactgaacgtgcccatgcagccc
ctctccgagcccaatgccgtgggactcatcctggcacatgggagtgtgggaggtgcagtt
tctgtgctttctccagacgtctttgtgtctgaagatgggggttacacatggtttcaggca
ctgaaaggcccccatcactatgccatcttggattcaggaggactgctagtagcagtggag
cacaacccctcacaccccatttcacagatcaaattttccactgatgaaggtcagtgctgg
catgtgcataacttcaccgatgaaccaatgtacttcactgggctggcatcagaacctggt
gcccgttccatgaatatcagcctttggggatacagggaaactgtcctgaatcagtactgg
gtttctgtcactattgacttcaggcagttgctctctagagactgtcaggagaatgactac
atccagtggctcgctcactcaagcgatattagcgaccccactgatgggtgcatgctggga
tacaaggaaaggtttttacggttacgaaaggactcagtctgctggaacgggcgggattac
attgtcaccaaggagcccaccacttgtccctgcactctcaatgactttcagtgtgacttt
ggattctatcatgcggaaaacagctctgtgtgtgtggagcagcccgaccttattggccat
tcactggagttctgcctgcatggacgcaaagagcagcttcagaccagcggttaccggaaa
attcccggggatcactgtgaaggaggaataactccagaacgaaaagagattgatctgagt
aagaaatgcgttagtaatttgctgaggacagagccactgacagaagaacattcattcaat
tcagcgcctataatcgttgtggtcatcgctgttctgttgatcagtgctgttgctggtgtt
attttcatcaaaaaatatgtctgtggaggaaggtttctggtgcacaggtactctgtatta
cagcagcacgctgaagctaacggtatcgaaggcgtggatgacctggacacactggagggt
ggcaagacacactaccgtgatgattcagatgaggacctcctagagtga
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