Cyprinus carpio (common carp): 109066535
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Entry
109066535 CDS
T05134
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109066535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109066535
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109066535
mRNA degradation factors
5'-3' decay
Lsm complex
109066535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
109066535
NCBI-ProteinID:
XP_018939110
Ensembl:
ENSCCRG00000046684
UniProt:
A0A8C1PRL3
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All DBs
Position
A8:complement(19946724..19949714)
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQILQRVSIEEILEEQRTEQQAKQESERLKLQAVKER
GLSIPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccagggactgcgagcctcatcgaggacattgataagaaacaccttgtc
ctccttcgcgatggaagaacattgattgggatccttagaagcatagatcagtttgctaat
ttagttttgcatcaaacggttgaacgtatccacgttggtaagaaatttggtgacataccc
cgtgggatatttgtcgtcagaggagaaaatgtggtcttgcttggagaagtagatctggat
aaagagtgtgatcagatcctccagagagtttccattgaggagatcctggaggaacagcgg
acagaacagcaagccaagcaagagtcagagagactgaagctacaggcggtgaaagagcga
ggcttatcgatccctaaagctgacacattagatgatttctga
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