Cyprinus carpio (common carp): 109066872
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Entry
109066872 CDS
T05134
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a isoform X3
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03020
RNA polymerase
ccar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109066872
09124 Replication and repair
03420 Nucleotide excision repair
109066872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109066872
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109066872
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109066872
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109066872
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
109066872
NCBI-ProteinID:
XP_018939425
Ensembl:
ENSCCRG00000024113
UniProt:
A0A8C1N3M2
LinkDB
All DBs
Position
B5:complement(21046355..21064604)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITIVKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccaccggcattcgagtcgtttttgctatttgagggagaaaagaagatcaca
atagttaaagacaccaaggtgccaaatgcatgtctgtttacactgaataaagaggatcac
actctggggaacatcatccggtcgcaactgctgaaggacccgcaggtgctgtttgctgga
tataaggttcctcatcctctggagcacaagatcgtgatccgtgttcagacgacaccagac
tacagtccccaggaagcattcactaatgccatcactgatctgatcagtgaactgtccctt
ctggaggagcgattcagggttgccatcaaagacaaacaagagggaatagaatga
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integrated database retrieval system
