Cyprinus carpio (common carp): 109066878
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Entry
109066878 CDS
T05134
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109066878 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ccar04030
]
109066878 (smo)
G protein-coupled receptors [BR:
ccar04030
]
Frizzled / Smoothened family
109066878 (smo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
109066878
NCBI-ProteinID:
XP_018939437
Ensembl:
ENSCCRG00000017052
UniProt:
A0A8C1NI87
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Position
B4:11806777..11813741
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AA seq
821 aa
AA seq
DB search
MSSKRLCSIVGGFWMLWIWAATSIIAQAVILHPNETIFNDFCKKSITCEVLKYNTCLGSP
LPYTHTSLILAEDSETQEEALEKLAMWSGLRNAPRCWAVIQPLLCAVYMPKCENGKVELP
SQHLCQATRKPCSIVERERGWPNFLKCENKEQFPKGCQNEVQKIKFNTSGQCEAPLVKTD
IQASWYKDVEGCGIQCNNPLFTEDEHSDMHNYIAIFGSITLLCTFFTLATFLADWKNSNR
YPAVILFYVNACFFIGSIGWLAQFMDGARKEIVCKSDDTMRLGEPSSTETLSCVIIFVIV
YYSLMSGVIWFVMLTYAWHTSFKALGTTHQPLSGKTSYFHLVTWSVPFILTVAILAIAEV
DGDSVSGICFVGYKNYRYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKA
ASKINETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTN
KPIPECAIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWFRIIGRSDDEPK
RIKKSKMIAKAFSKRKELQKDPEKELSFSMHTVSHEGPVAGINFDLNEPSMEMSSAWAQH
VTKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEAEISPEMMKRKKKKKRRKEIRP
TGPAADEGNPAYHRREFGPSSVPRLPKLPGHRSLVANLWEQQRQQQEEQDMLPGAFPEFR
PSCPLPYQERYGGLGYLRNKPSSLPLANPLTLRDSMQDDLGSFQQSSWQPNGVFRYLGQE
ASAMDAGRTAVVPRADGRRGVPIHSRTNLMEAELLDADSDF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaagcgcctctgctccattgttggaggcttttggatgctttggatctgggca
gcaacctctataatcgcgcaggcggtcatcttgcacccaaatgaaacgatattcaacgac
ttttgtaagaaatccataacttgtgaagtattaaaatacaatacgtgccttggttcaccc
ttgccgtacacgcacacgtctctgattctggctgaagactcagaaactcaagaggaagcc
ttggagaaattggccatgtggtctgggttgagaaatgctcctcgctgctgggccgtcatt
caaccgttactgtgtgccgtttacatgccaaaatgtgaaaatggaaaggtcgaactgccc
agccagcacctgtgccaagccacacgcaaaccttgcagtattgtggagcgggagaggggc
tggcccaacttcctcaagtgtgaaaacaaggagcagttccctaagggttgccagaacgag
gtccagaagatcaaattcaacacttcaggacagtgtgaggctcccctggtcaaaaccgac
atccaggcaagttggtacaaggacgtggaaggttgtgggatccagtgcaacaatcccctg
ttcacggaagacgagcactcggacatgcataactacattgccatcttcggctccatcact
ctcctgtgtaccttctttacgctggccacatttctcgccgactggaagaattccaaccgt
taccccgctgtgatcctcttttacgtcaacgcatgtttctttatcggaagtattggatgg
ctcgctcagttcatggatggagcccgcaaggagattgtgtgcaaaagcgacgatactatg
cggcttggagagccgtcatccaccgagacgctgtcgtgcgtgattatcttcgtcattgtg
tattattcgctaatgtctggagtcatttggtttgttatgctcacttatgcctggcacaca
tcgttcaaagccctgggcaccacccatcagcctctctctggaaaaacatcctattttcat
ctggtcacatggtctgttcctttcattctgacagttgctatattggccattgcagaggtg
gatggagattcggttagcggcatttgctttgttggctataagaactacagataccgtgca
gggtttgttctggctcctatcggggtggtccttgttgttggcggctatttcctaatacga
ggggttatgacgttgttttccattaaaagtaaccatccggggctgctcagtgaaaaagct
gctagtaaaatcaatgaaaccatgctgaggcttggcatatttggattcttggcctttggt
tttgttttcatcacgtttggctgccatttctacgactttttcaaccaagctgagtgggaa
aaaagcttcagggaatatgtactatgtgaggcgaatgtcaccatagctcaccagaccaac
aagccgatcccagagtgtgccatcaagaaccggcctagtctcctggtggagaagatcaac
ctcttctcaatgttcggcacgggcatcgcaatgagcacatgggtatggacgaaggccacc
atccttatctggaaacgcacctggtttagaatcattggccgaagtgatgatgagccgaaa
cgcattaagaagagtaaaatgattgccaaggcattttcaaagagaaaagaactgcagaag
gatccagaaaaagagctgtccttcagcatgcacaccgtttctcatgagggacctgtggcg
ggtatcaactttgacctgaatgagccatcaatggaaatgtcttctgcatgggcccaacat
gtgaccaagatggtggctagaagaggggcaattttaccacaggatatctctgtgacaccc
actggaacacctgttccgcctccagaggaaaggaacaaactttggatggttgaagcagaa
atttctcctgaaatgatgaaaagaaagaagaagaaaaagagaaggaaggaaatacggcca
acgggtcctgcagcggacgaagggaatcctgcctaccaccggagggagtttggtcccagc
tcagtcccccgtctcccaaaacttccaggtcaccggagtctggtggctaacctttgggag
cagcagcgacagcagcaggaggaacaggatatgctacctggagccttcccagaattcagg
ccttcatgtcctcttccttatcaggagaggtatggtgggttgggatacttacgcaataaa
ccctccagcctcccccttgccaatcccctgactctacgagatagcatgcaagatgatttg
ggcagcttccagcagtcatcatggcaaccaaatggggttttccggtaccttgggcaggag
gcttccgcgatggatgctggcaggactgccgttgtgccacgggccgatggcaggaggggt
gtaccaatacactccagaaccaatcttatggaggctgagctactggatgctgactcagat
ttttaa
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