Cyprinus carpio (common carp): 109067018
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Entry
109067018 CDS
T05134
Symbol
cntn1b
Name
(RefSeq) LOW QUALITY PROTEIN: contactin 1b
KO
K06759
contactin 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109067018 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109067018 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccar00537
]
109067018 (cntn1b)
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
Contactins
109067018 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccar00537
]
Others
109067018 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Fn3_VIN3
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
109067018
NCBI-ProteinID:
XP_042577906
Ensembl:
ENSCCRG00000019823
UniProt:
A0A9Q9W6Y4
LinkDB
All DBs
Position
B4:11093619..11105898
Genome browser
AA seq
1031 aa
AA seq
DB search
MVTPAMLLCVLSYFFLLAAAIKPRIFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPENKI
SMNCRARANPPAIIKWWLNNWEIKLMEQPDEHFSLVGGNLVITNPDKGKHAGKYVCVAKN
VYGTVISKEATVKFGYLNQFPTDEREPVHVKEGQGAVLLCSPPSRYPSEVLFRWIYNDFP
NFIIPDQRRFVSQTTGNMYIAKVEASDVGNYSCFVSSPTIGKSVFSMPIPLLPQIEKEVK
RYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMNGALLHLI
NVQYEDEGSYECETLNVKGMDWYRQWLYVEGAPEWAEHINDTEKDVGSELTLRCVAVGKP
LPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCVAENEWGTIYASAELRVVSCAPTFIYN
PVKKVLLGAENGRVVIECKPRAAPKPKFIWKRGSELLTNSSRMLIWDDGSLEILNVSKSD
EGSYTCYAENDRGKSNSTGTLTITEATKITVAPSDTEVVVGDTMILQCSASFDPSLDITF
IWTVDSYVINFYTDFEHYELLMNNENSXXISFKNIQVRHAGHYSCTAQTIVDNATAEADV
SVKGLPGPPGGVRVEEIGDTSVKLRWSLGSDHGSSLIQHVVQTRDFYALDPEDWKTASTS
PVFLDGSTESATIVDLYPWMQYEFRGEGVACRPSIKIKTWDARPTVAPSEVIGQVGISGE
LIVTWTPVKPQFFFGKKFGYIVAFKQHEDYEWKWATVEDPETRRYVYKESMTPDTEIQVK
VSTYNNKGEGPSSLISAVYSPRLAPTEAPLDVYARQVTSNXALHXTSGLAVWVDGYQVSP
QWKNWVDGYQIRYWRKYDDNEAAASRVIVHRTVNQTRLENMRPDSPLPSTRGTSLAFNGA
GLGPPSEHCEMFTRRPPPSRLLRVYKYVSFWLYLYWDHIYNYWNESYVEGYKILFRKEGE
RYGKLYTTGRHYIDFPMPETGDYIIEVRARCEGGDGPISQIRVQGKASLGPESLSVAAVL
LLALGWMNLGL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccccagccatgcttctgtgtgtgctctcttacttcttcttattggccgctgca
attaaacccaggatatttgaacccagaatttttgacaaggaggccacaggctttgggccc
atatttgaggaggaacccttggacacagtgtatgcggaggattcaccagagaacaaaatc
tccatgaactgcagggcacgggccaatcctccggccattatcaaatggtggttaaacaac
tgggaaattaaactgatggaacagcctgatgagcactttagcctggtgggaggaaacctg
gtcatcaccaacccagacaagggcaagcatgctgggaaatatgtgtgtgtggctaagaac
gtgtacggcactgtcatcagcaaagaggccaccgtcaaatttggatacctcaaccagttc
cctacagatgagagagagccggtgcatgttaaggaaggacagggagcggtactgttgtgt
tctcctccctctcgctatccaagtgaggtgttgttccgctggatctacaacgacttcccc
aacttcatcatcccagaccagaggcgttttgtgtctcagaccactgggaatatgtacatc
gctaaagtcgaggcatctgatgttgggaattattcttgctttgtgtcaagccccaccatt
ggcaagagtgttttcagcatgccgattcctctgcttccacaaatagagaaggaggtgaag
cgctatcctgctgatatccgtgtgaagttccccaagacttatgctttggtgcatcagaac
atcactctggagtgctttgcccttggaaatccgctcccacacatccgctggaggaagtta
gacgctgatctcccgcccaactatgaggtcagcatgaatggagctttactgcacctgatt
aacgttcagtatgaggatgaagggagctacgagtgtgagacgctcaatgttaaagggatg
gactggtatcgacagtggctctatgtggaaggtgctccagagtgggcagagcacatcaat
gacacggagaaagatgttggtagtgaactcactctcagatgtgttgctgtggggaagcct
ttaccatggatccgctggctgaaggacggctattcgtacggcaaaggggagctgaagttc
tccagtctcacgtttgaggattcggggatgtatcagtgtgttgctgagaatgaatggggg
accatctatgccagcgcagagcttcgtgttgtctcctgtgcaccaacattcatttataat
ccagtgaagaaggttctgctcggggctgaaaacggacgtgtggttatagagtgcaaaccc
cgcgctgctcctaaacccaagttcatctggaaacgaggctcagagctgctgaccaactct
tcaaggatgttaatttgggatgatggaagtctggagattctgaacgtgtcaaaaagtgac
gagggctcgtacacatgctatgcagagaatgaccgcggcaaatccaacagcacagggacc
ctcactatcaccgaggccaccaaaatcactgtggctccatcagacactgaggtggttgta
ggagacaccatgattctccagtgctctgcatcatttgaccccagcctggacatcaccttc
atctggactgttgattcctacgtcatcaacttctacacagacttcgaacactacgagctg
ctcatgaacaacgagaacagctgataaatatcattcaagaacattcaggtgaggcacgca
ggacactattcctgcacagctcagactatagtggacaacgccaccgcagaagctgatgtt
tctgtcaaaggtttgcctggtcctccaggtggagtccgtgtggaagagattggagacacg
tcagtaaaactacgatggagtctgggatcagaccacggtagttctcttatccaacatgtt
gtacaaacacgagacttttatgccctggatcctgaagactggaaaaccgcatccacctct
cctgtgtttttggacggatctacagagtcagccaccatagttgacctttacccctggatg
caatatgaattccggggggagggggtggcatgccgtccatcgatcaaaatcaagacatgg
gacgccaggcctacagtggctccttctgaagtcattgggcaagttggaataagcggagag
ctcatcgtgacctggactcctgtaaagcctcagttcttctttggtaaaaaatttggctac
atcgtggcgtttaagcagcatgaggattatgaatggaaatgggcaactgtggaggatcct
gagactagacgctatgtctacaaagagagcatgaccccagacactgagatacaggtcaaa
gtgagcacctacaataacaaaggagaaggaccctcaagtcttatatcggcggtctactca
ccaaggcttgcaccgactgaagctccattagacgtctacgcccgccaggtcacctctaat
taagctctccattagacctctggtctggcagtctgggtcgacggataccaggtgagtcct
cagtggaaaaactgggtcgacggataccagattcgttactggaggaagtacgatgataat
gaggctgctgcctctcgagttattgtgcacagaacagttaaccaaacacgcctggagaac
atgcggcctgactcccctctaccctcaactagaggtacgtctttagcattcaacggagct
gggctcgggccacccagcgagcattgtgaaatgttcaccaggagaccacccccaagtcgc
ctattgagagtctacaaatatgtcagcttctggctctatctgtattgggatcacatctat
aactactggaatgagtcctatgtggagggatacaagattttgttccggaaggaaggagag
cgttatgggaagctttacaccacaggcaggcactacattgactttcccatgccagagacg
ggcgattacatcatagaggtgcgagcccgctgtgagggaggtgatggacccatatcacag
atcagagtacaaggtaaagcctctctgggcccagagtctctcagcgtcgccgctgtcttg
cttctggcactgggctggatgaatttgggcctgtag
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integrated database retrieval system
