Cyprinus carpio (common carp): 109067074
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Entry
109067074 CDS
T05134
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109067074
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Others
EARP complex
109067074
Endosome - Golgi transport
Tethering complex
GARP complex
109067074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
Vps54_N
COG4_N
Laminin_II
GrpE
FBF1
Sec8_N
COG5_N
DUF677
COG3_N
Tropomyosin
NBD94
VPS51_Exo84_N
hAT-like_RNase-H
APG6_N
Snf7
FUSC
Med11
MCPsignal
XhlA
ERM_helical
DUF1664
LXG
Spectrin_Anc-1
ApoLp-III
BRE1
Dor1
BORCS8
Seryl_tRNA_N
ING
Motif
Other DBs
NCBI-GeneID:
109067074
NCBI-ProteinID:
XP_042627148
Ensembl:
ENSCCRG00000032413
UniProt:
A0A8C1YHE8
LinkDB
All DBs
Position
A15:complement(16049373..16073402)
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AA seq
832 aa
AA seq
DB search
MMEDEELEFVEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNNIRFKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEETFPAQGSKKSGGPSIVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRTELAKLMRARAREIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLNNGPGQKKPETPLEPTNPFLEDESGEDNVSEKDEDLDRPKKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSTSSGGLTISSLLKEKEGSEV
TKFTMEELCLICSILSTAEYCLATTQQLEEKLKEKVDKPLMERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADSNPETFQKILDMKGLKRS
EQSTMLELFRQRLPNPPSGPDAGPSLSFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgaagaattagagtttgtggaagatttggaggcgatattacaccttact
ccagaagtgcagctggccattgagcaggttttccccagccaggaccctttggatcgagcc
gacttcaatgccgttgaatacattaataccttgtttccaacagaacagtctttggcgaat
atagatgaagtggtgaataacattcgatttaaaatcagacgcctggatgacaacatcagg
acagtggtgaggggacagactaatgtggggcaggatggcagacaggcgttggaggaggcc
cagaaagccatccagcaactctttggcaaaatcaaagacatcaaagacaaagcagagaaa
tcggagcaaatggtgaaagagatcacacgagatatcaagcagctggaccacgcaaagcgt
cacctgaccacttctataaccaccctcaatcacctgcacatgctggctggcggagtggac
tctcttgaagctatgactcgaaagaggcagtatggggaagtggccaatctccttcagggt
gtagtcaacgtgctcgagcacttccagaagtacatgggcatcccccagattcgccagctc
tcagaaagagttaaagctgcacagagcgagcttggcacgcagatactggccgacttcgaa
gagacttttcctgcccaggggtcaaagaaatctggaggtcctagcattgttctcagagat
gcctgcttggtagcaaatgtcctggatcctcggattaagcaggagatcatcaaaaagttc
atcaggcagcacctttcagaatacctagtgctcttccaagaaaaccaggatgtggcgtgg
ctcgacaagatagaccggcgctatgcgtggatcaagcgtcagcttgtggactatgaagaa
aagtatgggcgaatgtttcctgaggagtggtgcatgaccgaacgcatcgctgtagagttc
tgtcatatcaccagaaccgagctggccaagctgatgcgagcccgtgccagggagatcgag
gtcaagcttttgctcttcgctattcagaggaccaccaattttgaaggactgctagctaag
cgcttctcaggctgcaccttaaacaacgggcctgggcagaaaaaacctgagacccctcta
gaaccaacaaacccctttttggaagatgagtcaggagaggacaatgtatcagaaaaggat
gaagatttggatagaccaaagaagcccaaggctccagacaaccccttccatggcattgtg
tccaagtgctttgagcctcatctctacgtttacatcgagtcgcaggataaaaatcttggc
gagctgatcgaccgttttgttgctgatttccgggcacagggtccccctaaatcaggcaca
gatgagggaggtgctgtgctccccagctgtgcagatctcttcgtgtactacaagaagtgt
atggtccagtgctcgcagctgagcaccggagaacccatgattgctttgaccaccattttc
cagaagtatctacgtgaatatgcctggaagatcctctctgggaacctaccaaagaccagc
accagtagtggtggtctgaccatcagcagcttgctgaaggagaaagagggatcagaagtg
accaagttcacaatggaagagttgtgtcttatttgcagcatcttaagcacggctgaatac
tgcctggctaccacacagcagctggaggagaagctcaaggagaaggtggacaagccccta
atggagagaatcaacttaactggggagatggacacctttagcacggttatctcaaacagt
atccagctcttggttcaggacctggatgctgcatgtgatccagccctcacagcaatgagc
aagatgccgtggcagagtgtggaacatgtgggagaccaaagcccgtatgtgacctctgta
atcatgcacatcaaacaaaatgtgcccatcattagagacaacctggcctccacccggaaa
tacttcacccagttctgcattaagttcaccaactccttcattccaaagttcatcaaccac
ctgttcaggtgtaagccaatcagcatggttggagcagagcagttactcctggacacacat
tccctcaagaccgttcttctagacctcccttccattggctctcaggtggtccgtaaagcc
ccggccagctacaccaaaatagtggttaaaggaatgactcgagcagagatgatcctcaag
gtggtcatggcccctcatgagccgtccgtggtctttgtggacaactacatcaagctcctt
gctgacagcaatcctgagacgttccaaaagattctagatatgaagggcctgaaacggagt
gagcagagcaccatgctggagcttttcagacagaggttgcctaatccgccgtcaggacca
gacgctggcccatcattgtccttcagtgcccccacccctgaacaagaatcttcccgtatc
cgcaaactggaaaagctcatcaaaaagaggattcagtaa
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