Cyprinus carpio (common carp): 109067162
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Entry
109067162 CDS
T05134
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109067162 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109067162 (dhx36)
03012 Translation factors [BR:
ccar03012
]
109067162 (dhx36)
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109067162 (dhx36)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109067162 (dhx36)
Translation factors [BR:
ccar03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109067162 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_14
NPHP3_N
NB-ARC
ABC_tran
TsaE
Motif
Other DBs
NCBI-GeneID:
109067162
NCBI-ProteinID:
XP_042630974
UniProt:
A0A9Q9Z2R9
LinkDB
All DBs
Position
A18:complement(12458523..12488404)
Genome browser
AA seq
1022 aa
AA seq
DB search
MNHGYGNRRGRRGGGRRFGDGGSRWDEGAGSSGGGGYTRNSEWDSREERGHGGERRGGGG
GRGKHPPHLKGREIGLWYAKYGGIKRSEAERKSRAVVQMDEQREQHITQLLNSVQRDASR
DPHPSTSQNWRVKEEPSGHSYFDGDDPPEPQNIVKVPKIEPKEEKQENEDELGASVKEEL
NDTDLEYLFQDVVRIPSLDEELKKDKQKKKDNARYLDMLKFREKLPSYGMREELVRLINA
NQVLVISGETGCGKTTQVTQFILDDFIQRGMGSLCRVVCTQPRRISAISVAERVAAERAE
SVGEGKSCGYQIRLQCRLPRKQGSVLYCTTGIILQWLRSDPYLSSVSHLILDEIHERSLQ
SDVLLSIVKDLLTAREDLKVVLMSATLNAEKFSKYFNNCSMIHIPGYTYPVKEYLLEDVV
ELLRFKPQHQDRRPRYRRGFMHGQNVRPEKEQKEAEYRESWPCFARTLRDRYSDSTIDAL
EMMDDDDKINLELIVALIRHIVMKEDNGAILVFLPGWDNISTLNDLLMADQIFKSDRFMI
IPLHSLMPTVSQTQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQN
NIRTMTAEWVSLANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCL
QIKILKLGPIASFLRKTMDPPADKAIELAITHLVDLNALDRNEELTPLGFHLARMPVEPH
IGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADKRRKILSRNSRSDHLTIVN
ALWGWEDAKKQGSRFEKEYCWENFLSANTLQMLQNMKGQFAEHLLAAGFVNSKDPKDPSS
NINSENEKLIKAVIVAGLYPKVAKIRPNHSKKRPMPVKVYTKADGKVCIHPKSVNAEETQ
FHYTWLIYHLKMKTTSLFLYDCTEVSPFSLLFFGGYISIQRDQDQETIAVDEWIVFQSPA
RIAHLVKSIQLGVGIFIGGEVKNPRPVVWNDRRSKDCAVLSAIIDLITTQETPAGGPRRG
SQ
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgggtatggtaatagacgtggtcggagaggaggaggtcggcgtttcggagat
ggaggttccagatgggatgaaggggctggatccagtggaggtggaggatacacgaggaac
tccgagtgggactcaagggaagagcggggacatggaggggaacgaagaggaggaggagga
ggaagaggcaaacatccaccccatttgaagggtcgagaaataggactgtggtatgccaag
tatggaggaattaaaagatctgaggcagagaggaaatctagggctgttgttcagatggat
gaacaacgagagcagcacattacacagctgctgaactctgtccagagagatgcaagcaga
gatccgcacccctccacatctcagaactggagggtgaaggaggagcccagtggccacagt
tactttgatggagatgatcctccagaacctcagaacattgtaaaagtgccaaaaattgag
cctaaagaggagaaacaggagaatgaggatgagttgggagcaagtgtgaaagaggaactt
aatgacactgacctggagtacttattccaagatgttgtgcggataccctccctggatgag
gagctaaagaaagataagcagaagaaaaaagataatgctagataccttgatatgctgaaa
ttcagagagaagctgccttcctatggcatgagagaggagctggttaggctaatcaatgct
aaccaggtactggtaatcagtggagagactggctgtgggaagaccacccaggttactcag
ttcatccttgatgacttcattcagaggggcatgggctctctctgcagggtggtttgcaca
cagccaaggcgtatcagcgccatatctgttgcagagagggtggctgcagaacgggcagaa
tcggtgggagaggggaagtcctgtgggtatcagatccgtctgcagtgtcggttaccacgg
aaacaaggttcagtgttgtattgtacgacgggcattattcttcagtggctccgctcagat
ccatatctctcaagcgtaagtcatctgatcctggatgaaattcatgagaggagtcttcag
tctgatgttcttctcagcatcgtgaaggacctgttaactgctcgagaggacctaaaagta
gtcctcatgagtgccacgcttaacgcggaaaaattcagcaaatatttcaataactgttcc
atgatccatattcctggatacacatacccagtgaaagagtacttactggaggatgtggtg
gaattacttaggttcaagccacaacatcaggaccgcagacctcgctataggagaggattt
atgcacggccagaatgtacgaccagagaaagaacagaaagaggctgaataccgcgagagc
tggccatgcttcgcccgtacgctcagagatcggtactcagacagcaccattgatgcgctg
gagatgatggatgatgatgacaagatcaacctggagcttatcgtagcattgatcagacac
atcgtgatgaaagaagataatggagcgattctggtgtttctgcctggatgggacaacatc
agcaccctgaatgatttgctcatggctgaccagatttttaagtcagatcggtttatgatc
atccccctccactctttgatgcccacagtgtctcagactcaggtgttcaaaaagccgcct
ccgggagtgcgcaagattgtcatcgctaccaatattgcagaaaccagtatcacaatagat
gatgtcgtgtatgtgatagatggagggaagataaaagaaactcattttgacacccagaat
aatatcaggaccatgacagcagagtgggtgagcttagccaacgccaaacagaggaagggc
cgtgctggcagagtgtctcctgggaaatgctatcacctgtataatggactgagggccagc
cttctggataactaccagttacctgagatccaacgcactccactggaagagctttgcttg
caaataaagatactgaagttgggacccattgcatcattcctgcgaaaaaccatggacccc
ccggcggacaaagcgatagaactggccatcacacacctggtggacctgaatgccctggac
cggaatgaagagttaactccattaggatttcatctcgcccgcatgcctgtagagcctcac
ataggaaaaatgattctgttcggggctcttctgggctgtttggaccctgtgcttaccatt
gcggccagccttagctttaaagatcccttcttcataccactgggaaaggagaagattgcg
gacaagaggaggaaaatcctctcccgaaactctagaagtgatcatctcactattgtcaat
gcattgtggggctgggaggatgctaagaaacagggcagcaggtttgagaaggaatactgc
tgggaaaatttcctatctgccaacacgctacagatgcttcaaaatatgaagggtcagttt
gcagagcatcttttggcagctggctttgtgaatagtaaggaccctaaagatcccagctct
aacatcaactcagagaatgagaagctgattaaggctgtgatcgtagcaggtttgtatcct
aaagtggccaagattcgccccaaccatagtaagaagagaccaatgccagtgaaggtttac
actaaggctgatgggaaagtttgtatccaccctaaatctgtcaatgcagaggaaacacag
ttccactacacgtggctcatttatcacctgaagatgaagaccaccagtctcttcctctac
gactgcaccgaagtttctccattttcattgttgtttttcggagggtatatttccatccag
agggaccaggaccaagagacaatcgccgtggacgagtggattgtgtttcagtccccggca
cgcattgcgcacctggtcaaaagcattcagttgggggttggaatttttattgggggggag
gtaaaaaatccacgccctgtggtctggaatgaccggagatctaaagattgtgctgttctc
tctgctataatcgacctcatcacaacacaggaaacccctgctggaggccccaggagaggc
agccagtga
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